| Chain sequence(s) |
A: CAESCVWIPCTVTALLGCSCSNKVCYNGIP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:04)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.0000 | |
| 2 | A | A | 0.5320 | |
| 3 | E | A | 0.4302 | |
| 4 | S | A | 0.2339 | |
| 5 | C | A | 0.0000 | |
| 6 | V | A | 1.0304 | |
| 7 | W | A | 2.2033 | |
| 8 | I | A | 2.4535 | |
| 9 | P | A | 1.1881 | |
| 10 | C | A | 1.1664 | |
| 11 | T | A | 1.5399 | |
| 12 | V | A | 2.3186 | |
| 13 | T | A | 1.7462 | |
| 14 | A | A | 1.5552 | |
| 15 | L | A | 2.5834 | |
| 16 | L | A | 2.2781 | |
| 17 | G | A | 1.0232 | |
| 18 | C | A | 0.0000 | |
| 19 | S | A | -0.1422 | |
| 20 | C | A | -0.2796 | |
| 21 | S | A | -0.8069 | |
| 22 | N | A | -1.6066 | |
| 23 | K | A | -1.2097 | |
| 24 | V | A | -0.1552 | |
| 25 | C | A | 0.0000 | |
| 26 | Y | A | 0.5113 | |
| 27 | N | A | -0.2598 | |
| 28 | G | A | -0.0325 | |
| 29 | I | A | 1.3076 | |
| 30 | P | A | 0.6673 |