Project name: query_structure

Status: done

Started: 2026-03-16 23:57:13
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Chain sequence(s) A: MAQVQLLESGGGLVQPGGSLRLSCAASGFKITNKTMAWVRQAPGKGLEWVSSIGSSSGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARRKGNRLGPAALRSWGQGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:10)
Show buried residues

Minimal score value
-3.189
Maximal score value
1.6024
Average score
-0.6994
Total score value
-86.7283

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.8784
2 A A 0.0755
3 Q A -0.6342
4 V A 0.3208
5 Q A -0.2406
6 L A 0.0000
7 L A 0.8888
8 E A 0.2240
9 S A -0.3645
10 G A -0.6928
11 G A 0.0978
12 G A 0.7104
13 L A 1.4256
14 V A -0.0144
15 Q A -1.2964
16 P A -1.5507
17 G A -1.3771
18 G A -0.9138
19 S A -1.2813
20 L A -1.1031
21 R A -2.2940
22 L A 0.0000
23 S A -0.6192
24 C A 0.0000
25 A A -0.1135
26 A A 0.0000
27 S A -0.4414
28 G A -0.4160
29 F A -1.0067
30 K A -2.5433
31 I A 0.0000
32 T A -1.9552
33 N A -2.2185
34 K A -2.2399
35 T A -1.5546
36 M A 0.0000
37 A A 0.0000
38 W A 0.0000
39 V A 0.0000
40 R A 0.0000
41 Q A -0.6836
42 A A -1.1235
43 P A -1.3180
44 G A -1.5100
45 K A -2.2605
46 G A -1.3131
47 L A -0.3020
48 E A -0.6950
49 W A 0.0000
50 V A 0.0000
51 S A 0.0000
52 S A 0.0910
53 I A 0.0000
54 G A -0.9301
55 S A -1.1631
56 S A -0.8826
57 S A -0.6583
58 G A -0.5238
59 S A -0.3231
60 T A 0.1070
61 Y A 0.2393
62 Y A -0.5885
63 A A 0.0000
64 D A -2.3547
65 S A -1.7663
66 V A 0.0000
67 K A -2.4786
68 G A -1.6952
69 R A -1.2541
70 F A 0.0000
71 T A -0.8888
72 I A 0.0000
73 S A -0.6890
74 R A -1.3109
75 D A -1.9153
76 N A -2.4929
77 S A -1.9948
78 K A -2.6474
79 N A -2.1544
80 T A 0.0000
81 L A 0.0000
82 Y A 0.0000
83 L A 0.0000
84 Q A -1.5765
85 M A 0.0000
86 N A -1.3629
87 S A -1.1908
88 L A 0.0000
89 R A -2.3190
90 A A -1.7618
91 E A -2.2867
92 D A 0.0000
93 T A -0.3805
94 A A 0.0000
95 V A 0.8547
96 Y A 0.0000
97 Y A 0.3078
98 C A 0.0000
99 A A 0.0000
100 R A -1.3771
101 R A -2.2027
102 K A -3.1890
103 G A -2.6316
104 N A -2.4322
105 R A -2.2971
106 L A 0.0397
107 G A 0.0044
108 P A -0.2983
109 A A -0.5816
110 A A 0.0000
111 L A -1.4622
112 R A -2.3691
113 S A -0.9746
114 W A -0.1623
115 G A -0.0822
116 Q A -0.7301
117 G A 0.0240
118 T A 0.5893
119 L A 1.6024
120 V A 0.0000
121 T A 0.4239
122 V A 0.0000
123 S A -0.6501
124 S A -0.5259
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Laboratory of Theory of Biopolymers 2018