| Chain sequence(s) |
A: MAQVQLLESGGGLVQPGGSLRLSCAASGFKITNKTMAWVRQAPGKGLEWVSSIGSSSGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARRKGNRLGPAALRSWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:09)
[INFO] Main: Simulation completed successfully. (00:01:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8784 | |
| 2 | A | A | 0.0755 | |
| 3 | Q | A | -0.6342 | |
| 4 | V | A | 0.3208 | |
| 5 | Q | A | -0.2406 | |
| 6 | L | A | 0.0000 | |
| 7 | L | A | 0.8888 | |
| 8 | E | A | 0.2240 | |
| 9 | S | A | -0.3645 | |
| 10 | G | A | -0.6928 | |
| 11 | G | A | 0.0978 | |
| 12 | G | A | 0.7104 | |
| 13 | L | A | 1.4256 | |
| 14 | V | A | -0.0144 | |
| 15 | Q | A | -1.2964 | |
| 16 | P | A | -1.5507 | |
| 17 | G | A | -1.3771 | |
| 18 | G | A | -0.9138 | |
| 19 | S | A | -1.2813 | |
| 20 | L | A | -1.1031 | |
| 21 | R | A | -2.2940 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.6192 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.1135 | |
| 26 | A | A | 0.0000 | |
| 27 | S | A | -0.4414 | |
| 28 | G | A | -0.4160 | |
| 29 | F | A | -1.0067 | |
| 30 | K | A | -2.5433 | |
| 31 | I | A | 0.0000 | |
| 32 | T | A | -1.9552 | |
| 33 | N | A | -2.2185 | |
| 34 | K | A | -2.2399 | |
| 35 | T | A | -1.5546 | |
| 36 | M | A | 0.0000 | |
| 37 | A | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | V | A | 0.0000 | |
| 40 | R | A | 0.0000 | |
| 41 | Q | A | -0.6836 | |
| 42 | A | A | -1.1235 | |
| 43 | P | A | -1.3180 | |
| 44 | G | A | -1.5100 | |
| 45 | K | A | -2.2605 | |
| 46 | G | A | -1.3131 | |
| 47 | L | A | -0.3020 | |
| 48 | E | A | -0.6950 | |
| 49 | W | A | 0.0000 | |
| 50 | V | A | 0.0000 | |
| 51 | S | A | 0.0000 | |
| 52 | S | A | 0.0910 | |
| 53 | I | A | 0.0000 | |
| 54 | G | A | -0.9301 | |
| 55 | S | A | -1.1631 | |
| 56 | S | A | -0.8826 | |
| 57 | S | A | -0.6583 | |
| 58 | G | A | -0.5238 | |
| 59 | S | A | -0.3231 | |
| 60 | T | A | 0.1070 | |
| 61 | Y | A | 0.2393 | |
| 62 | Y | A | -0.5885 | |
| 63 | A | A | 0.0000 | |
| 64 | D | A | -2.3547 | |
| 65 | S | A | -1.7663 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.4786 | |
| 68 | G | A | -1.6952 | |
| 69 | R | A | -1.2541 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.8888 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.6890 | |
| 74 | R | A | -1.3109 | |
| 75 | D | A | -1.9153 | |
| 76 | N | A | -2.4929 | |
| 77 | S | A | -1.9948 | |
| 78 | K | A | -2.6474 | |
| 79 | N | A | -2.1544 | |
| 80 | T | A | 0.0000 | |
| 81 | L | A | 0.0000 | |
| 82 | Y | A | 0.0000 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.5765 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -1.3629 | |
| 87 | S | A | -1.1908 | |
| 88 | L | A | 0.0000 | |
| 89 | R | A | -2.3190 | |
| 90 | A | A | -1.7618 | |
| 91 | E | A | -2.2867 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.3805 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | 0.8547 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | 0.3078 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | R | A | -1.3771 | |
| 101 | R | A | -2.2027 | |
| 102 | K | A | -3.1890 | |
| 103 | G | A | -2.6316 | |
| 104 | N | A | -2.4322 | |
| 105 | R | A | -2.2971 | |
| 106 | L | A | 0.0397 | |
| 107 | G | A | 0.0044 | |
| 108 | P | A | -0.2983 | |
| 109 | A | A | -0.5816 | |
| 110 | A | A | 0.0000 | |
| 111 | L | A | -1.4622 | |
| 112 | R | A | -2.3691 | |
| 113 | S | A | -0.9746 | |
| 114 | W | A | -0.1623 | |
| 115 | G | A | -0.0822 | |
| 116 | Q | A | -0.7301 | |
| 117 | G | A | 0.0240 | |
| 118 | T | A | 0.5893 | |
| 119 | L | A | 1.6024 | |
| 120 | V | A | 0.0000 | |
| 121 | T | A | 0.4239 | |
| 122 | V | A | 0.0000 | |
| 123 | S | A | -0.6501 | |
| 124 | S | A | -0.5259 |