Project name: 2510-11.pdb

Status: done

Started: 2026-03-11 10:08:50
Settings
Chain sequence(s) H: EVQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGGINPSNGRTNYNEKFKNKATLTVDKSSSTAYMQLSSLTYEDSAVYYCTRATIPFAYWGQGTLVTVSA
L: DVQMIQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPYTFGGGTKLELK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:39)
Show buried residues

Minimal score value
-3.5125
Maximal score value
1.6405
Average score
-0.6261
Total score value
-139.6163

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.1506
2 V H -1.2460
3 Q H -2.1057
4 L H 0.0000
5 Q H -2.1686
6 Q H 0.0000
7 S H -0.9387
8 G H -0.5921
9 A H 0.2597
11 E H 0.0880
12 L H 1.0279
13 V H -0.1645
14 K H -1.3297
15 P H -0.9021
16 G H -0.8989
17 A H -0.8795
18 S H -0.9551
19 V H 0.0000
20 K H -1.3170
21 L H 0.0000
22 S H -0.6416
23 C H 0.0000
24 K H -1.5578
25 A H 0.0000
26 S H -1.3998
27 G H -1.2693
28 Y H -0.5467
29 T H -0.0992
30 F H 0.0000
35 T H -0.6956
36 S H -0.0165
37 Y H 0.5357
38 W H 0.2324
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -0.9008
45 R H -1.6247
46 P H -1.0902
47 G H -1.4031
48 Q H -1.9876
49 G H -1.3511
50 L H 0.0000
51 E H -0.9975
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 G H 0.0000
56 I H 0.0000
57 N H -1.0799
58 P H 0.0000
59 S H -1.4537
62 N H -2.2504
63 G H -2.1078
64 R H -2.4746
65 T H -1.1874
66 N H -0.6953
67 Y H -1.0652
68 N H -2.1191
69 E H -3.5125
70 K H -3.3274
71 F H 0.0000
72 K H -3.2558
74 N H -2.7136
75 K H -1.9614
76 A H 0.0000
77 T H -0.8016
78 L H 0.0000
79 T H -0.5517
80 V H -0.6758
81 D H -1.4342
82 K H -2.2469
83 S H -1.2249
84 S H -0.9999
85 S H -1.1505
86 T H 0.0000
87 A H 0.0000
88 Y H -0.1495
89 M H 0.0000
90 Q H -0.9870
91 L H 0.0000
92 S H -0.9296
93 S H -0.9295
94 L H 0.0000
95 T H -0.4859
96 Y H 0.1288
97 E H -1.3361
98 D H 0.0000
99 S H -0.0748
100 A H 0.0000
101 V H 0.1993
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 T H 0.0000
106 R H 0.0000
107 A H 0.0000
108 T H 0.8485
109 I H 1.6405
114 P H 0.0000
115 F H 0.0000
116 A H 0.4383
117 Y H 0.2445
118 W H -0.3489
119 G H 0.0000
120 Q H -1.6905
121 G H -0.5634
122 T H 0.0000
123 L H 0.8006
124 V H 0.0000
125 T H 0.4169
126 V H 0.0000
127 S H -0.0697
128 A H -0.2922
1 D L -2.2712
2 V L -1.6711
3 Q L -1.8708
4 M L 0.0000
5 I L -0.1879
6 Q L -0.5290
7 S L -0.4772
8 P L -0.4204
9 S L -0.6670
10 S L -0.8872
11 L L -0.5513
12 S L -0.9006
13 A L 0.0000
14 S L -0.6979
15 L L 0.3387
16 G L -0.7301
17 E L -1.4844
18 R L -2.2091
19 V L 0.0000
20 S L -0.6650
21 L L 0.0000
22 T L -0.6764
23 C L 0.0000
24 R L -2.4587
25 A L 0.0000
26 S L -1.9536
27 Q L -2.8255
28 E L -2.6582
29 I L 0.0000
36 S L -0.7599
37 G L -0.1522
38 Y L 1.0371
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 L L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.4946
46 P L -1.3102
47 D L -2.2204
48 G L -1.5283
49 T L -1.2202
50 I L 0.0000
51 K L -0.7860
52 R L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.7264
56 A L 0.5336
57 A L 0.0000
65 S L -0.2929
66 T L 0.0256
67 L L -0.1832
68 D L -0.5246
69 S L -0.4714
70 G L -0.8146
71 V L 0.0000
72 P L -1.1320
74 K L -1.9300
75 R L -1.5014
76 F L 0.0000
77 S L -0.6820
78 G L -0.4863
79 S L -1.0153
80 R L -1.8176
83 S L -1.3534
84 G L -1.4667
85 S L -1.9792
86 D L -1.7817
87 Y L 0.0000
88 S L -0.9065
89 L L 0.0000
90 T L -0.6707
91 I L 0.0000
92 S L -1.5900
93 S L -1.2923
94 L L 0.0000
95 E L -1.0806
96 S L -1.0582
97 E L -2.0127
98 D L 0.0000
99 F L -0.7886
100 A L 0.0000
101 D L -1.1964
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 A L 0.3670
109 S L -0.1114
114 Y L 0.1323
115 P L -0.5259
116 Y L -0.1034
117 T L -0.4912
118 F L -0.1118
119 G L 0.0000
120 G L -0.7487
121 G L -0.8843
122 T L 0.0000
123 K L -1.4920
124 L L 0.0000
125 E L -1.4039
126 L L -0.6029
127 K L -1.4932
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Laboratory of Theory of Biopolymers 2018