Project name: Lenvervimab

Status: done

Started: 2026-03-23 07:25:01
Settings
Chain sequence(s) H: EVQLVESGGGLVKPGGSLRLSCSASGFSLTKYKMTWVRQAPGKGLEWVSSISSTSRDIDYADSVKGRFTISRDNAKNSLFLQMSSLRVDDTAVYYCTRDGWLWGWDVRSNYYYNALDVWGQGTTVTVSS
L: DIVVTQSPSSLSASVGDRVTITCRASQGIYNSIAWYQQKPGKAPKLLLYSTSTLLSGVPSRFSGSGSGTDYTLTITNLQPEDFATYYCQQYFVTPETFGQGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:09)
Show buried residues

Minimal score value
-2.7052
Maximal score value
1.5728
Average score
-0.4683
Total score value
-110.5203

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.6533
2 V H -0.3614
3 Q H -0.7986
4 L H 0.0000
5 V H 0.2374
6 E H 0.0000
7 S H -0.5629
8 G H -0.8254
9 G H -0.3430
11 G H 0.4480
12 L H 1.0932
13 V H -0.0558
14 K H -1.5228
15 P H -1.0651
16 G H -1.1822
17 G H -0.9901
18 S H -1.0150
19 L H -0.8572
20 R H -1.8584
21 L H 0.0000
22 S H -0.4681
23 C H 0.0000
24 S H -0.4133
25 A H -0.4228
26 S H -0.5559
27 G H -0.8214
28 F H -0.4291
29 S H -0.6257
30 L H 0.0000
35 T H -0.7995
36 K H -1.0404
37 Y H -0.2848
38 K H 0.0000
39 M H 0.0000
40 T H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.8293
45 A H -1.2265
46 P H -1.0029
47 G H -1.5321
48 K H -2.3643
49 G H -1.6219
50 L H 0.0000
51 E H -1.0015
52 W H 0.0000
53 V H 0.0000
54 S H 0.0000
55 S H 0.0000
56 I H 0.0000
57 S H 0.0000
58 S H -0.8656
59 T H -1.0810
62 S H -1.3412
63 R H -2.2819
64 D H -1.7216
65 I H -0.2122
66 D H -0.5877
67 Y H -0.7911
68 A H -1.6438
69 D H -2.7052
70 S H -1.7086
71 V H 0.0000
72 K H -2.6465
74 G H -1.6755
75 R H -1.4987
76 F H 0.0000
77 T H -0.7676
78 I H 0.0000
79 S H -0.2846
80 R H -0.8268
81 D H -1.3265
82 N H -1.5025
83 A H -1.2289
84 K H -2.1160
85 N H -1.4189
86 S H 0.0000
87 L H 0.0000
88 F H -0.5085
89 L H 0.0000
90 Q H -1.4113
91 M H 0.0000
92 S H -0.9999
93 S H -1.0926
94 L H 0.0000
95 R H -1.3862
96 V H 0.0103
97 D H -1.3433
98 D H 0.0000
99 T H -0.1437
100 A H 0.0000
101 V H 0.0105
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 T H 0.0000
106 R H -0.3512
107 D H 0.0000
108 G H 0.0782
109 W H 0.5459
110 L H 1.2447
111 W H 0.8913
111A G H 0.7080
111B W H 1.1751
111C D H 0.2715
111D V H 0.7358
112E R H -1.1856
112D S H -0.7423
112C N H -0.1486
112B Y H 0.7948
112A Y H 1.2077
112 Y H 1.2980
113 N H 0.0000
114 A H 0.0000
115 L H 0.0000
116 D H -0.4306
117 V H -0.0559
118 W H -0.2320
119 G H 0.0000
120 Q H -1.4571
121 G H -0.6789
122 T H -0.3045
123 T H 0.0552
124 V H 0.0000
125 T H 0.1932
126 V H 0.0000
127 S H -0.2626
128 S H -0.4289
1 D L -1.4972
2 I L 0.0000
3 V L 0.7335
4 V L 0.0000
5 T L -0.7165
6 Q L 0.0000
7 S L -0.7476
8 P L -0.6431
9 S L -0.9453
10 S L -1.0399
11 L L -0.7293
12 S L -1.0146
13 A L 0.0000
14 S L -0.7879
15 V L -0.0397
16 G L -1.1443
17 D L -1.7165
18 R L -2.4645
19 V L 0.0000
20 T L -0.5679
21 I L 0.0000
22 T L -0.7826
23 C L 0.0000
24 R L -2.1873
25 A L 0.0000
26 S L -0.7573
27 Q L -0.9690
28 G L -0.4611
29 I L 0.0000
36 Y L 0.9210
37 N L 0.0255
38 S L 0.6591
39 I L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.7380
44 Q L 0.0000
45 K L -1.6705
46 P L -1.2104
47 G L -1.7207
48 K L -2.5415
49 A L -1.5296
50 P L 0.0000
51 K L -1.1740
52 L L 0.0000
53 L L 0.0000
54 L L 0.0000
55 Y L 0.2487
56 S L 0.1183
57 T L 0.0000
65 S L -0.2034
66 T L 0.1816
67 L L 0.4642
68 L L 0.1766
69 S L -0.1905
70 G L -0.3828
71 V L -0.1508
72 P L -0.2807
74 S L -0.3557
75 R L -0.9786
76 F L 0.0000
77 S L -0.2612
78 G L -0.2237
79 S L -0.6419
80 G L -0.9468
83 S L -0.7194
84 G L -0.6730
85 T L -1.3316
86 D L -1.8560
87 Y L 0.0000
88 T L -0.6969
89 L L 0.0000
90 T L -0.6737
91 I L 0.0000
92 T L -1.6662
93 N L -2.0500
94 L L 0.0000
95 Q L -0.9081
96 P L -0.9562
97 E L -1.6207
98 D L 0.0000
99 F L -0.3793
100 A L 0.0000
101 T L -0.9930
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 F L 1.5728
109 V L 1.0110
114 T L 0.2965
115 P L -0.4186
116 E L 0.0000
117 T L 0.1193
118 F L 0.0006
119 G L 0.0000
120 Q L -1.5784
121 G L 0.0000
122 T L 0.0000
123 K L -1.8011
124 L L 0.0000
125 E L -1.3762
126 I L -0.5610
127 K L -1.4492
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Laboratory of Theory of Biopolymers 2018