| Chain sequence(s) |
H: EVQLVESGGGLVKPGGSLRLSCSASGFSLTKYKMTWVRQAPGKGLEWVSSISSTSRDIDYADSVKGRFTISRDNAKNSLFLQMSSLRVDDTAVYYCTRDGWLWGWDVRSNYYYNALDVWGQGTTVTVSS
L: DIVVTQSPSSLSASVGDRVTITCRASQGIYNSIAWYQQKPGKAPKLLLYSTSTLLSGVPSRFSGSGSGTDYTLTITNLQPEDFATYYCQQYFVTPETFGQGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:08)
[INFO] Main: Simulation completed successfully. (00:01:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.6533 | |
| 2 | V | H | -0.3614 | |
| 3 | Q | H | -0.7986 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.2374 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5629 | |
| 8 | G | H | -0.8254 | |
| 9 | G | H | -0.3430 | |
| 11 | G | H | 0.4480 | |
| 12 | L | H | 1.0932 | |
| 13 | V | H | -0.0558 | |
| 14 | K | H | -1.5228 | |
| 15 | P | H | -1.0651 | |
| 16 | G | H | -1.1822 | |
| 17 | G | H | -0.9901 | |
| 18 | S | H | -1.0150 | |
| 19 | L | H | -0.8572 | |
| 20 | R | H | -1.8584 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.4681 | |
| 23 | C | H | 0.0000 | |
| 24 | S | H | -0.4133 | |
| 25 | A | H | -0.4228 | |
| 26 | S | H | -0.5559 | |
| 27 | G | H | -0.8214 | |
| 28 | F | H | -0.4291 | |
| 29 | S | H | -0.6257 | |
| 30 | L | H | 0.0000 | |
| 35 | T | H | -0.7995 | |
| 36 | K | H | -1.0404 | |
| 37 | Y | H | -0.2848 | |
| 38 | K | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | T | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.8293 | |
| 45 | A | H | -1.2265 | |
| 46 | P | H | -1.0029 | |
| 47 | G | H | -1.5321 | |
| 48 | K | H | -2.3643 | |
| 49 | G | H | -1.6219 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0015 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | S | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.0000 | |
| 58 | S | H | -0.8656 | |
| 59 | T | H | -1.0810 | |
| 62 | S | H | -1.3412 | |
| 63 | R | H | -2.2819 | |
| 64 | D | H | -1.7216 | |
| 65 | I | H | -0.2122 | |
| 66 | D | H | -0.5877 | |
| 67 | Y | H | -0.7911 | |
| 68 | A | H | -1.6438 | |
| 69 | D | H | -2.7052 | |
| 70 | S | H | -1.7086 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.6465 | |
| 74 | G | H | -1.6755 | |
| 75 | R | H | -1.4987 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7676 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2846 | |
| 80 | R | H | -0.8268 | |
| 81 | D | H | -1.3265 | |
| 82 | N | H | -1.5025 | |
| 83 | A | H | -1.2289 | |
| 84 | K | H | -2.1160 | |
| 85 | N | H | -1.4189 | |
| 86 | S | H | 0.0000 | |
| 87 | L | H | 0.0000 | |
| 88 | F | H | -0.5085 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.4113 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -0.9999 | |
| 93 | S | H | -1.0926 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -1.3862 | |
| 96 | V | H | 0.0103 | |
| 97 | D | H | -1.3433 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.1437 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.0105 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | T | H | 0.0000 | |
| 106 | R | H | -0.3512 | |
| 107 | D | H | 0.0000 | |
| 108 | G | H | 0.0782 | |
| 109 | W | H | 0.5459 | |
| 110 | L | H | 1.2447 | |
| 111 | W | H | 0.8913 | |
| 111A | G | H | 0.7080 | |
| 111B | W | H | 1.1751 | |
| 111C | D | H | 0.2715 | |
| 111D | V | H | 0.7358 | |
| 112E | R | H | -1.1856 | |
| 112D | S | H | -0.7423 | |
| 112C | N | H | -0.1486 | |
| 112B | Y | H | 0.7948 | |
| 112A | Y | H | 1.2077 | |
| 112 | Y | H | 1.2980 | |
| 113 | N | H | 0.0000 | |
| 114 | A | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | -0.4306 | |
| 117 | V | H | -0.0559 | |
| 118 | W | H | -0.2320 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.4571 | |
| 121 | G | H | -0.6789 | |
| 122 | T | H | -0.3045 | |
| 123 | T | H | 0.0552 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.1932 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.2626 | |
| 128 | S | H | -0.4289 | |
| 1 | D | L | -1.4972 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.7335 | |
| 4 | V | L | 0.0000 | |
| 5 | T | L | -0.7165 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7476 | |
| 8 | P | L | -0.6431 | |
| 9 | S | L | -0.9453 | |
| 10 | S | L | -1.0399 | |
| 11 | L | L | -0.7293 | |
| 12 | S | L | -1.0146 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.7879 | |
| 15 | V | L | -0.0397 | |
| 16 | G | L | -1.1443 | |
| 17 | D | L | -1.7165 | |
| 18 | R | L | -2.4645 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5679 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7826 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.1873 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.7573 | |
| 27 | Q | L | -0.9690 | |
| 28 | G | L | -0.4611 | |
| 29 | I | L | 0.0000 | |
| 36 | Y | L | 0.9210 | |
| 37 | N | L | 0.0255 | |
| 38 | S | L | 0.6591 | |
| 39 | I | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.7380 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.6705 | |
| 46 | P | L | -1.2104 | |
| 47 | G | L | -1.7207 | |
| 48 | K | L | -2.5415 | |
| 49 | A | L | -1.5296 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.1740 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | L | L | 0.0000 | |
| 55 | Y | L | 0.2487 | |
| 56 | S | L | 0.1183 | |
| 57 | T | L | 0.0000 | |
| 65 | S | L | -0.2034 | |
| 66 | T | L | 0.1816 | |
| 67 | L | L | 0.4642 | |
| 68 | L | L | 0.1766 | |
| 69 | S | L | -0.1905 | |
| 70 | G | L | -0.3828 | |
| 71 | V | L | -0.1508 | |
| 72 | P | L | -0.2807 | |
| 74 | S | L | -0.3557 | |
| 75 | R | L | -0.9786 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.2612 | |
| 78 | G | L | -0.2237 | |
| 79 | S | L | -0.6419 | |
| 80 | G | L | -0.9468 | |
| 83 | S | L | -0.7194 | |
| 84 | G | L | -0.6730 | |
| 85 | T | L | -1.3316 | |
| 86 | D | L | -1.8560 | |
| 87 | Y | L | 0.0000 | |
| 88 | T | L | -0.6969 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6737 | |
| 91 | I | L | 0.0000 | |
| 92 | T | L | -1.6662 | |
| 93 | N | L | -2.0500 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.9081 | |
| 96 | P | L | -0.9562 | |
| 97 | E | L | -1.6207 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.3793 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.9930 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | F | L | 1.5728 | |
| 109 | V | L | 1.0110 | |
| 114 | T | L | 0.2965 | |
| 115 | P | L | -0.4186 | |
| 116 | E | L | 0.0000 | |
| 117 | T | L | 0.1193 | |
| 118 | F | L | 0.0006 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.5784 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.8011 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.3762 | |
| 126 | I | L | -0.5610 | |
| 127 | K | L | -1.4492 |