| Chain sequence(s) |
H: QVTLREESGPALVKPTQTLTLTCTVSGFSLSAYSVNWIRQPPGKALEWLAMIWGDGKIVYNSALKSRLTISKDTSKNQVVLTMTNMDPVDTATYYCAGDGYYPYAMDNWGQGSLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK
L: DIVMTQSPDSLSVSLGERATINCRASKSVDSYGNSFMHWYQQKPGQPPKLLIYLASNLESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQNNEDPRTFGGGTKVEIKRTVAAPSVFIFPPSDEEQLKSGTASVVCLLNNFYPREAKVQQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACCEVTHQGLSSPVTKSFNRGEC input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:16)
[INFO] Main: Simulation completed successfully. (00:08:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.0476 | |
| 2 | V | H | -0.2095 | |
| 3 | T | H | -0.6350 | |
| 4 | L | H | 0.0000 | |
| 5 | R | H | -2.0322 | |
| 6 | E | H | -1.3108 | |
| 7 | S | H | -0.7267 | |
| 8 | G | H | -0.2471 | |
| 9 | P | H | -0.1115 | |
| 10 | A | H | -0.2674 | |
| 11 | L | H | -0.2293 | |
| 12 | V | H | 0.0000 | |
| 13 | K | H | -2.4988 | |
| 14 | P | H | -1.8204 | |
| 15 | T | H | -2.0137 | |
| 16 | Q | H | -2.3344 | |
| 17 | T | H | -1.4324 | |
| 18 | L | H | 0.0000 | |
| 19 | T | H | -0.1740 | |
| 20 | L | H | 0.0000 | |
| 21 | T | H | -0.4095 | |
| 22 | C | H | 0.0000 | |
| 23 | T | H | -1.1286 | |
| 24 | V | H | 0.0000 | |
| 25 | S | H | -0.7202 | |
| 26 | G | H | -0.4726 | |
| 27 | F | H | 0.1029 | |
| 28 | S | H | -0.1602 | |
| 29 | L | H | 0.0000 | |
| 30 | S | H | -0.8435 | |
| 31 | A | H | -0.4372 | |
| 32 | Y | H | 0.0000 | |
| 33 | S | H | 0.0000 | |
| 34 | V | H | 0.0000 | |
| 35 | N | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | I | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.8741 | |
| 40 | P | H | -0.6586 | |
| 41 | P | H | -1.0348 | |
| 42 | G | H | -1.4404 | |
| 43 | K | H | -2.1942 | |
| 44 | A | H | -1.2109 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -0.7956 | |
| 47 | W | H | 0.0000 | |
| 48 | L | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | M | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | W | H | -0.8957 | |
| 53 | G | H | -1.2369 | |
| 54 | D | H | -2.2469 | |
| 55 | G | H | -1.7188 | |
| 56 | K | H | -1.7115 | |
| 57 | I | H | 0.0718 | |
| 58 | V | H | 0.0000 | |
| 59 | Y | H | -0.5228 | |
| 60 | N | H | -1.1965 | |
| 61 | S | H | -1.2571 | |
| 62 | A | H | -0.5412 | |
| 63 | L | H | -0.8704 | |
| 64 | K | H | -1.8633 | |
| 65 | S | H | -1.1660 | |
| 66 | R | H | -1.2067 | |
| 67 | L | H | 0.0000 | |
| 68 | T | H | -0.2167 | |
| 69 | I | H | 0.0000 | |
| 70 | S | H | -0.2052 | |
| 71 | K | H | -1.0689 | |
| 72 | D | H | -1.5826 | |
| 73 | T | H | -1.3511 | |
| 74 | S | H | -1.4759 | |
| 75 | K | H | -2.2791 | |
| 76 | N | H | -1.5921 | |
| 77 | Q | H | -1.4467 | |
| 78 | V | H | 0.0000 | |
| 79 | V | H | 0.0931 | |
| 80 | L | H | 0.0000 | |
| 81 | T | H | -0.0316 | |
| 82 | M | H | 0.0000 | |
| 82A | T | H | -1.2528 | |
| 82B | N | H | -2.2560 | |
| 82C | M | H | 0.0000 | |
| 83 | D | H | -1.3921 | |
| 84 | P | H | -0.2026 | |
| 85 | V | H | 1.2812 | |
| 86 | D | H | 0.0000 | |
| 87 | T | H | 0.2697 | |
| 88 | A | H | 0.0000 | |
| 89 | T | H | -0.1997 | |
| 90 | Y | H | 0.0000 | |
| 91 | Y | H | 0.0000 | |
| 92 | C | H | 0.0000 | |
| 93 | A | H | 0.0000 | |
| 94 | G | H | 0.0000 | |
| 95 | D | H | 0.0000 | |
| 96 | G | H | 0.6105 | |
| 97 | Y | H | 1.9264 | |
| 98 | Y | H | 2.1989 | |
| 99 | P | H | 0.0000 | |
| 100 | Y | H | 1.3400 | |
| 100A | A | H | 0.0000 | |
| 100B | M | H | 0.0000 | |
| 101 | D | H | -1.3945 | |
| 102 | N | H | -0.9156 | |
| 103 | W | H | -1.1354 | |
| 104 | G | H | 0.0000 | |
| 105 | Q | H | -1.8663 | |
| 106 | G | H | -1.2155 | |
| 107 | S | H | -0.6147 | |
| 108 | L | H | -0.1044 | |
| 109 | V | H | 0.0000 | |
| 110 | T | H | 0.0000 | |
| 111 | V | H | 0.0000 | |
| 112 | S | H | -0.9641 | |
| 113 | S | H | -0.8812 | |
| 114 | A | H | -0.5381 | |
| 115 | S | H | -0.6587 | |
| 116 | T | H | -0.7160 | |
| 117 | K | H | -1.1819 | |
| 118 | G | H | -1.3802 | |
| 119 | P | H | -0.5762 | |
| 120 | S | H | -0.3445 | |
| 121 | V | H | -0.3425 | |
| 122 | F | H | 0.0000 | |
| 123 | P | H | -1.0932 | |
| 124 | L | H | 0.0000 | |
| 125 | A | H | 0.0000 | |
| 126 | P | H | 0.0000 | |
| 127 | C | H | -0.8785 | |
| 128 | S | H | -0.8671 | |
| 129 | R | H | -1.0260 | |
| 130 | S | H | -0.9263 | |
| 131 | T | H | -0.7109 | |
| 132 | S | H | -0.8806 | |
| 133 | E | H | -1.3663 | |
| 134 | S | H | -0.9410 | |
| 135 | T | H | -0.6876 | |
| 136 | A | H | 0.0000 | |
| 137 | A | H | 0.0000 | |
| 138 | L | H | 0.0000 | |
| 139 | G | H | 0.0000 | |
| 140 | C | H | 0.0000 | |
| 141 | L | H | 0.0000 | |
| 142 | V | H | 0.0000 | |
| 143 | K | H | 0.0000 | |
| 144 | D | H | -0.3237 | |
| 145 | Y | H | 0.0000 | |
| 146 | F | H | 0.0000 | |
| 147 | P | H | 0.0000 | |
| 148 | E | H | -0.3451 | |
| 149 | P | H | -0.6488 | |
| 150 | V | H | 0.0000 | |
| 151 | T | H | -0.6774 | |
| 152 | V | H | -0.2465 | |
| 153 | S | H | -0.4891 | |
| 154 | W | H | 0.0000 | |
| 155 | N | H | -1.0125 | |
| 156 | S | H | -0.8022 | |
| 157 | G | H | -0.6019 | |
| 158 | A | H | -0.2783 | |
| 159 | L | H | -0.1192 | |
| 160 | T | H | -0.2124 | |
| 161 | S | H | -0.2206 | |
| 162 | G | H | -0.3406 | |
| 163 | V | H | 0.1275 | |
| 164 | H | H | -0.3083 | |
| 165 | T | H | -0.0181 | |
| 166 | F | H | 0.0000 | |
| 167 | P | H | -0.3766 | |
| 168 | A | H | 0.2142 | |
| 169 | V | H | 0.6150 | |
| 170 | L | H | 1.2784 | |
| 171 | Q | H | 0.3950 | |
| 172 | S | H | -0.0268 | |
| 173 | S | H | -0.1723 | |
| 174 | G | H | 0.1029 | |
| 175 | L | H | 0.2367 | |
| 176 | Y | H | 0.5218 | |
| 177 | S | H | 0.0000 | |
| 178 | L | H | 0.0000 | |
| 179 | S | H | 0.0000 | |
| 180 | S | H | 0.0000 | |
| 181 | V | H | 0.0000 | |
| 182 | V | H | 0.0000 | |
| 183 | T | H | -0.1350 | |
| 184 | V | H | 0.0000 | |
| 185 | P | H | -0.5186 | |
| 186 | S | H | -0.6719 | |
| 187 | S | H | -0.6610 | |
| 188 | S | H | -0.7382 | |
| 189 | L | H | -0.8212 | |
| 190 | G | H | -1.1476 | |
| 191 | T | H | -1.0181 | |
| 192 | K | H | -1.7708 | |
| 193 | T | H | -1.6377 | |
| 194 | Y | H | 0.0000 | |
| 195 | T | H | -1.9686 | |
| 196 | C | H | 0.0000 | |
| 197 | N | H | -1.6459 | |
| 198 | V | H | 0.0000 | |
| 199 | D | H | -2.0680 | |
| 200 | H | H | 0.0000 | |
| 201 | K | H | -2.7552 | |
| 202 | P | H | -1.5383 | |
| 203 | S | H | -1.8066 | |
| 204 | N | H | -2.6065 | |
| 205 | T | H | -2.1015 | |
| 206 | K | H | -2.7477 | |
| 207 | V | H | -1.5031 | |
| 208 | D | H | -2.6710 | |
| 209 | K | H | -2.1691 | |
| 210 | R | H | -2.8693 | |
| 211 | V | H | 0.0000 | |
| 212 | E | H | -2.7579 | |
| 213 | S | H | -1.8378 | |
| 214 | K | H | -2.5742 | |
| 1 | D | L | -2.3843 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.6590 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.8490 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -1.5701 | |
| 8 | P | L | -1.4224 | |
| 9 | D | L | -2.2055 | |
| 10 | S | L | -1.1871 | |
| 11 | L | L | -0.6634 | |
| 12 | S | L | -0.4670 | |
| 13 | V | L | -0.9374 | |
| 14 | S | L | -0.9051 | |
| 15 | L | L | 0.0780 | |
| 16 | G | L | -0.9510 | |
| 17 | E | L | -2.3176 | |
| 18 | R | L | -2.5843 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.7365 | |
| 21 | I | L | 0.0000 | |
| 22 | N | L | -1.9183 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.3971 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.1992 | |
| 27 | K | L | -2.3705 | |
| 27A | S | L | -1.9196 | |
| 27B | V | L | 0.0000 | |
| 27C | D | L | -1.3328 | |
| 27D | S | L | -0.4649 | |
| 28 | Y | L | 0.6023 | |
| 29 | G | L | -0.5444 | |
| 30 | N | L | -1.0724 | |
| 31 | S | L | -0.7704 | |
| 32 | F | L | -0.5407 | |
| 33 | M | L | 0.0000 | |
| 34 | H | L | 0.0000 | |
| 35 | W | L | 0.0000 | |
| 36 | Y | L | 0.0000 | |
| 37 | Q | L | 0.0000 | |
| 38 | Q | L | 0.0000 | |
| 39 | K | L | -1.6217 | |
| 40 | P | L | -1.3453 | |
| 41 | G | L | -1.4991 | |
| 42 | Q | L | -1.8558 | |
| 43 | P | L | -1.4407 | |
| 44 | P | L | 0.0000 | |
| 45 | K | L | -1.9038 | |
| 46 | L | L | 0.0000 | |
| 47 | L | L | 0.0000 | |
| 48 | I | L | 0.0000 | |
| 49 | Y | L | 0.2076 | |
| 50 | L | L | 0.0941 | |
| 51 | A | L | 0.0000 | |
| 52 | S | L | -0.5981 | |
| 53 | N | L | -0.6866 | |
| 54 | L | L | -0.4192 | |
| 55 | E | L | -0.9891 | |
| 56 | S | L | -0.7557 | |
| 57 | G | L | -0.8322 | |
| 58 | V | L | 0.0000 | |
| 59 | P | L | -1.1928 | |
| 60 | D | L | -2.0555 | |
| 61 | R | L | -1.5907 | |
| 62 | F | L | 0.0000 | |
| 63 | S | L | -0.7935 | |
| 64 | G | L | -0.5163 | |
| 65 | S | L | -0.9311 | |
| 66 | G | L | -1.3055 | |
| 67 | S | L | -1.3714 | |
| 68 | G | L | -1.5755 | |
| 69 | T | L | -1.8858 | |
| 70 | D | L | -2.3121 | |
| 71 | F | L | 0.0000 | |
| 72 | T | L | -1.1579 | |
| 73 | L | L | 0.0000 | |
| 74 | T | L | -0.7300 | |
| 75 | I | L | 0.0000 | |
| 76 | S | L | -1.7265 | |
| 77 | S | L | -1.3828 | |
| 78 | L | L | 0.0000 | |
| 79 | Q | L | -1.2873 | |
| 80 | A | L | -1.6308 | |
| 81 | E | L | -2.3302 | |
| 82 | D | L | 0.0000 | |
| 83 | V | L | 0.0000 | |
| 84 | A | L | 0.0000 | |
| 85 | V | L | -0.3131 | |
| 86 | Y | L | 0.0000 | |
| 87 | Y | L | 0.0000 | |
| 88 | C | L | 0.0000 | |
| 89 | Q | L | 0.0000 | |
| 90 | Q | L | 0.0000 | |
| 91 | N | L | -1.2175 | |
| 92 | N | L | -2.0234 | |
| 93 | E | L | -3.4839 | |
| 94 | D | L | -3.1531 | |
| 95 | P | L | 0.0000 | |
| 96 | R | L | 0.0000 | |
| 97 | T | L | -0.5696 | |
| 98 | F | L | 0.2264 | |
| 99 | G | L | 0.0000 | |
| 100 | G | L | -0.8921 | |
| 101 | G | L | -1.0416 | |
| 102 | T | L | 0.0000 | |
| 103 | K | L | -0.7772 | |
| 104 | V | L | 0.0000 | |
| 105 | E | L | -0.9629 | |
| 106 | I | L | 0.0000 | |
| 107 | K | L | -1.1831 | |
| 108 | R | L | -0.6161 | |
| 109 | T | L | 0.1179 | |
| 110 | V | L | 0.7318 | |
| 111 | A | L | 0.1203 | |
| 112 | A | L | -0.0514 | |
| 113 | P | L | 0.0000 | |
| 114 | S | L | -0.2240 | |
| 115 | V | L | 0.0000 | |
| 116 | F | L | 0.0000 | |
| 117 | I | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | P | L | 0.0000 | |
| 120 | P | L | 0.0000 | |
| 121 | S | L | 0.0000 | |
| 122 | D | L | -3.1107 | |
| 123 | E | L | -2.9454 | |
| 124 | Q | L | 0.0000 | |
| 125 | L | L | -2.2397 | |
| 126 | K | L | -2.8106 | |
| 127 | S | L | -1.7158 | |
| 128 | G | L | -1.1840 | |
| 129 | T | L | -1.0040 | |
| 130 | A | L | 0.0000 | |
| 131 | S | L | 0.0000 | |
| 132 | V | L | 0.0000 | |
| 133 | V | L | 0.0000 | |
| 134 | C | L | 0.0000 | |
| 135 | L | L | 0.0000 | |
| 136 | L | L | 0.0000 | |
| 137 | N | L | 0.0000 | |
| 138 | N | L | -0.9665 | |
| 139 | F | L | 0.0000 | |
| 140 | Y | L | 0.0000 | |
| 141 | P | L | -1.6665 | |
| 142 | R | L | -3.0347 | |
| 143 | E | L | -3.2574 | |
| 144 | A | L | -2.3721 | |
| 145 | K | L | -2.4538 | |
| 146 | V | L | -1.1222 | |
| 147 | Q | L | -0.5177 | |
| 148 | W | L | 0.0000 | |
| 149 | K | L | -0.5117 | |
| 150 | V | L | 0.0000 | |
| 151 | D | L | -1.8426 | |
| 152 | N | L | -1.4770 | |
| 153 | A | L | -0.2299 | |
| 154 | L | L | 0.7806 | |
| 155 | Q | L | -0.2391 | |
| 156 | S | L | -0.6551 | |
| 157 | G | L | -1.2240 | |
| 158 | N | L | -1.5287 | |
| 159 | S | L | -1.3188 | |
| 160 | Q | L | -1.1755 | |
| 161 | E | L | -1.6281 | |
| 162 | S | L | -0.7127 | |
| 163 | V | L | -0.7813 | |
| 164 | T | L | -1.0713 | |
| 165 | E | L | -2.0593 | |
| 166 | Q | L | 0.0000 | |
| 167 | D | L | -2.1583 | |
| 168 | S | L | -2.3989 | |
| 169 | K | L | -2.6706 | |
| 170 | D | L | -1.9597 | |
| 171 | S | L | 0.0000 | |
| 172 | T | L | 0.0000 | |
| 173 | Y | L | 0.0000 | |
| 174 | S | L | 0.0000 | |
| 175 | L | L | 0.0000 | |
| 176 | S | L | 0.0000 | |
| 177 | S | L | 0.0000 | |
| 178 | T | L | -0.6329 | |
| 179 | L | L | 0.0000 | |
| 180 | T | L | -0.6354 | |
| 181 | L | L | -0.8992 | |
| 182 | S | L | -1.0922 | |
| 183 | K | L | -2.0778 | |
| 184 | A | L | -1.9385 | |
| 185 | D | L | -2.7038 | |
| 186 | Y | L | 0.0000 | |
| 187 | E | L | -3.4831 | |
| 188 | K | L | -3.6250 | |
| 189 | H | L | -2.8885 | |
| 190 | K | L | -2.8165 | |
| 191 | V | L | -1.1125 | |
| 192 | Y | L | 0.0000 | |
| 193 | A | L | 0.0000 | |
| 194 | C | L | 0.0000 | |
| 195 | E | L | -0.8582 | |
| 196 | V | L | 0.0000 | |
| 197 | T | L | -1.2318 | |
| 198 | H | L | 0.0000 | |
| 199 | Q | L | -1.6728 | |
| 200 | G | L | -0.3028 | |
| 201 | L | L | -0.2046 | |
| 202 | S | L | -0.4820 | |
| 203 | S | L | -0.4267 | |
| 204 | P | L | -0.5650 | |
| 205 | V | L | -0.0091 | |
| 206 | T | L | -0.4567 | |
| 207 | K | L | -0.6988 | |
| 208 | S | L | -0.4810 | |
| 209 | F | L | 0.0000 | |
| 210 | N | L | -1.3301 | |
| 211 | R | L | -2.2128 | |
| 212 | G | L | -1.8566 | |
| 213 | E | L | -2.2538 | |
| 214 | C | L | -0.5496 |