| Chain sequence(s) |
A: FFKGHGF
C: FFKGHGF B: FFKGHGF D: FFKGHGF input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:27)
[INFO] Main: Simulation completed successfully. (00:00:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 3.5770 | |
| 2 | F | A | 1.5781 | |
| 3 | K | A | -1.0730 | |
| 4 | G | A | 0.0000 | |
| 5 | H | A | -0.7893 | |
| 6 | G | A | 0.0000 | |
| 7 | F | A | 3.3739 | |
| 1 | F | B | 3.4605 | |
| 2 | F | B | 1.8698 | |
| 3 | K | B | -0.6500 | |
| 4 | G | B | -1.5035 | |
| 5 | H | B | -0.7448 | |
| 6 | G | B | 1.4622 | |
| 7 | F | B | 3.4329 | |
| 1 | F | C | 3.4807 | |
| 2 | F | C | 1.8374 | |
| 3 | K | C | -0.8193 | |
| 4 | G | C | -1.8620 | |
| 5 | H | C | -1.2104 | |
| 6 | G | C | 1.4518 | |
| 7 | F | C | 3.5653 | |
| 1 | F | D | 3.3791 | |
| 2 | F | D | 1.6007 | |
| 3 | K | D | -1.1919 | |
| 4 | G | D | 0.0000 | |
| 5 | H | D | -1.1766 | |
| 6 | G | D | 1.2998 | |
| 7 | F | D | 3.1296 |