| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVVYYVITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAYSDQVEYYEYFYGSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:20)
[INFO] Main: Simulation completed successfully. (00:01:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7841 | |
| 2 | S | A | 0.7281 | |
| 3 | S | A | 0.9788 | |
| 4 | V | A | 0.3159 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.7003 | |
| 7 | K | A | -2.6621 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9321 | |
| 10 | V | A | 0.1010 | |
| 11 | V | A | 1.5379 | |
| 12 | A | A | 0.8979 | |
| 13 | A | A | 0.2989 | |
| 14 | T | A | -0.3406 | |
| 15 | P | A | -1.1186 | |
| 16 | T | A | -0.9951 | |
| 17 | S | A | -0.5286 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7555 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9869 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.7027 | |
| 24 | A | A | -1.2521 | |
| 25 | P | A | -0.0294 | |
| 26 | A | A | 0.4355 | |
| 27 | V | A | 0.4726 | |
| 28 | T | A | -0.1749 | |
| 29 | V | A | -0.0619 | |
| 30 | V | A | 0.1229 | |
| 31 | Y | A | 0.1195 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | 0.1857 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.3724 | |
| 36 | Y | A | -0.2905 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.5479 | |
| 39 | T | A | -1.2631 | |
| 40 | G | A | -1.2411 | |
| 41 | G | A | -1.4277 | |
| 42 | N | A | -1.5369 | |
| 43 | S | A | -0.8319 | |
| 44 | P | A | -0.3153 | |
| 45 | V | A | 0.4443 | |
| 46 | Q | A | -0.8282 | |
| 47 | E | A | -1.4866 | |
| 48 | F | A | -0.4768 | |
| 49 | T | A | -0.0603 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.4691 | |
| 52 | G | A | -0.3102 | |
| 53 | S | A | -0.8996 | |
| 54 | K | A | -1.9121 | |
| 55 | S | A | -1.4114 | |
| 56 | T | A | -0.7634 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2425 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6569 | |
| 61 | G | A | -1.0282 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3608 | |
| 64 | P | A | -1.6477 | |
| 65 | G | A | -1.4450 | |
| 66 | V | A | -1.4056 | |
| 67 | D | A | -2.1010 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7935 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.0454 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.7189 | |
| 74 | A | A | 0.0000 | |
| 75 | Y | A | 0.0000 | |
| 76 | S | A | 0.3355 | |
| 77 | D | A | -1.2588 | |
| 78 | Q | A | -0.9144 | |
| 79 | V | A | 0.2490 | |
| 80 | E | A | -0.7590 | |
| 81 | Y | A | 1.0605 | |
| 82 | Y | A | 1.3057 | |
| 83 | E | A | 0.3097 | |
| 84 | Y | A | 1.7481 | |
| 85 | F | A | 2.3028 | |
| 86 | Y | A | 2.3658 | |
| 87 | G | A | 1.3757 | |
| 88 | S | A | 0.4702 | |
| 89 | P | A | 0.3288 | |
| 90 | I | A | 0.0840 | |
| 91 | S | A | -0.5230 | |
| 92 | I | A | -0.7230 | |
| 93 | N | A | -1.7458 | |
| 94 | Y | A | -1.4987 | |
| 95 | R | A | -2.5374 | |
| 96 | T | A | -1.6407 |