| Chain sequence(s) |
L: KVDAQADPLGAWYD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:11)
[INFO] Main: Simulation completed successfully. (00:00:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 311 | K | L | -1.5266 | |
| 312 | V | L | 0.3176 | |
| 313 | D | L | -1.6040 | |
| 314 | A | L | -0.5233 | |
| 315 | Q | L | -1.1771 | |
| 316 | A | L | -0.3462 | |
| 317 | D | L | -1.0874 | |
| 318 | P | L | -0.1540 | |
| 319 | L | L | 1.4855 | |
| 320 | G | L | 0.1936 | |
| 321 | A | L | 0.1041 | |
| 322 | W | L | 1.4254 | |
| 323 | Y | L | 1.2075 | |
| 324 | D | L | -1.5522 |