| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPVHGGADVRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRNGPDGHPLPAAPPPSPLYVPPPPDSPYAVLPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQICTPLPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9508 | |
| 2 | L | A | 1.9786 | |
| 3 | P | A | 0.6643 | |
| 4 | P | A | 0.3270 | |
| 5 | T | A | 0.0781 | |
| 6 | T | A | 0.1032 | |
| 7 | P | A | 0.1245 | |
| 8 | V | A | 1.2079 | |
| 9 | A | A | 0.0266 | |
| 10 | K | A | -1.1501 | |
| 11 | V | A | -0.3973 | |
| 12 | Q | A | -1.5419 | |
| 13 | S | A | -1.6048 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4011 | |
| 16 | E | A | -2.4316 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4605 | |
| 20 | P | A | 0.1084 | |
| 21 | T | A | 0.1147 | |
| 22 | S | A | -0.1709 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1055 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1820 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7878 | |
| 31 | R | A | -2.6281 | |
| 32 | L | A | -0.7539 | |
| 33 | L | A | 1.2301 | |
| 34 | T | A | 1.4606 | |
| 35 | V | A | 1.9894 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2232 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6210 | |
| 40 | K | A | -1.8485 | |
| 41 | D | A | -0.7130 | |
| 42 | I | A | 1.2573 | |
| 43 | V | A | 2.2055 | |
| 44 | V | A | 1.6646 | |
| 45 | N | A | -0.5161 | |
| 46 | G | A | -0.3591 | |
| 47 | K | A | -0.1157 | |
| 48 | V | A | 2.2110 | |
| 49 | L | A | 2.5394 | |
| 50 | V | A | 1.4864 | |
| 51 | P | A | 0.3761 | |
| 52 | K | A | -0.6692 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1125 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4739 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2616 | |
| 70 | K | A | -1.8109 | |
| 71 | F | A | -0.6708 | |
| 72 | A | A | -0.5845 | |
| 73 | L | A | -0.9391 | |
| 74 | P | A | -1.2642 | |
| 75 | Q | A | -2.4755 | |
| 76 | K | A | -3.0938 | |
| 77 | D | A | -2.9917 | |
| 78 | F | A | -1.6489 | |
| 79 | Y | A | -1.9249 | |
| 80 | D | A | -2.7695 | |
| 81 | P | A | -2.3509 | |
| 82 | E | A | -3.0663 | |
| 83 | K | A | -3.4453 | |
| 84 | E | A | -2.5048 | |
| 85 | R | A | -1.3089 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6559 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9567 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3007 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7239 | |
| 99 | G | A | -0.5280 | |
| 100 | P | A | -0.4301 | |
| 101 | L | A | -0.0132 | |
| 102 | G | A | -0.3484 | |
| 103 | K | A | -0.9078 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4992 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1564 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4408 | |
| 110 | L | A | 0.4630 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0209 | |
| 113 | K | A | -0.4768 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -1.0834 | |
| 116 | D | A | -1.8211 | |
| 117 | T | A | -1.3285 | |
| 118 | E | A | -2.6392 | |
| 119 | N | A | -2.7049 | |
| 120 | P | A | -2.1381 | |
| 121 | T | A | -1.6512 | |
| 122 | E | A | -2.1579 | |
| 123 | P | A | -0.5110 | |
| 124 | V | A | -0.3351 | |
| 125 | H | A | -0.2817 | |
| 126 | G | A | -0.8232 | |
| 127 | G | A | -1.1883 | |
| 128 | A | A | -1.1252 | |
| 129 | D | A | -1.8614 | |
| 130 | V | A | -0.8822 | |
| 131 | R | A | -0.7170 | |
| 132 | V | A | 0.4646 | |
| 133 | A | A | 0.4566 | |
| 134 | F | A | 0.2880 | |
| 135 | S | A | -0.0691 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7496 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2525 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5676 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2674 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0937 | |
| 157 | D | A | 0.2750 | |
| 158 | I | A | 0.8342 | |
| 159 | A | A | 0.1088 | |
| 160 | E | A | -1.4822 | |
| 161 | P | A | -0.2524 | |
| 162 | C | A | 0.1728 | |
| 163 | P | A | -0.1776 | |
| 164 | G | A | -0.0839 | |
| 165 | L | A | 0.5809 | |
| 166 | P | A | -0.1187 | |
| 167 | P | A | -0.3435 | |
| 168 | G | A | -0.4212 | |
| 169 | A | A | -0.0235 | |
| 170 | C | A | 0.7506 | |
| 171 | P | A | 0.5463 | |
| 172 | P | A | 0.6809 | |
| 173 | I | A | 2.0331 | |
| 174 | Q | A | 0.8363 | |
| 175 | L | A | 1.4468 | |
| 176 | V | A | 0.8164 | |
| 177 | N | A | -0.3665 | |
| 178 | S | A | -0.0096 | |
| 179 | V | A | 0.3724 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3649 | |
| 182 | D | A | 0.0805 | |
| 183 | G | A | -0.1584 | |
| 184 | D | A | -0.5872 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1360 | |
| 190 | F | A | 0.0585 | |
| 191 | G | A | -0.1069 | |
| 192 | N | A | -0.2992 | |
| 193 | M | A | -0.1755 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4064 | |
| 197 | E | A | -2.5976 | |
| 198 | L | A | -1.1975 | |
| 199 | Q | A | -2.5142 | |
| 200 | Q | A | -3.3303 | |
| 201 | D | A | -3.5931 | |
| 202 | R | A | -3.3209 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2090 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3858 | |
| 211 | S | A | -1.9158 | |
| 212 | T | A | -1.5003 | |
| 213 | R | A | -2.2278 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1833 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2775 | |
| 220 | L | A | 0.4721 | |
| 221 | K | A | -1.3618 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9806 | |
| 224 | N | A | -1.5911 | |
| 225 | E | A | -1.3358 | |
| 226 | A | A | -0.6804 | |
| 227 | Y | A | -0.4602 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7212 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1359 | |
| 234 | F | A | 0.0454 | |
| 235 | G | A | -0.9390 | |
| 236 | R | A | -2.7257 | |
| 237 | R | A | -3.0642 | |
| 238 | E | A | -2.2041 | |
| 239 | Q | A | -0.1886 | |
| 240 | V | A | 1.5322 | |
| 241 | Y | A | 1.2169 | |
| 242 | A | A | 0.1266 | |
| 243 | R | A | -1.2210 | |
| 244 | H | A | -1.2914 | |
| 245 | F | A | -0.3755 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5730 | |
| 249 | N | A | -1.1879 | |
| 250 | G | A | -1.0552 | |
| 251 | P | A | -1.0032 | |
| 252 | D | A | -1.2223 | |
| 253 | G | A | -1.2167 | |
| 254 | H | A | -1.3392 | |
| 255 | P | A | -0.6549 | |
| 256 | L | A | 0.4473 | |
| 257 | P | A | 0.0798 | |
| 258 | A | A | -0.0084 | |
| 259 | A | A | 0.3602 | |
| 260 | P | A | -0.2281 | |
| 261 | P | A | -0.1415 | |
| 262 | P | A | 0.0669 | |
| 263 | S | A | 0.5708 | |
| 264 | P | A | 0.6852 | |
| 265 | L | A | 1.9272 | |
| 266 | Y | A | 1.7561 | |
| 267 | V | A | 1.9395 | |
| 268 | P | A | 1.0182 | |
| 269 | P | A | 0.4780 | |
| 270 | P | A | -0.6188 | |
| 271 | P | A | -0.8963 | |
| 272 | D | A | -1.6961 | |
| 273 | S | A | -0.5163 | |
| 274 | P | A | 0.0387 | |
| 275 | Y | A | 1.4650 | |
| 276 | A | A | 0.9994 | |
| 277 | V | A | 2.0971 | |
| 278 | L | A | 1.8559 | |
| 279 | P | A | 0.6386 | |
| 280 | P | A | -0.0364 | |
| 281 | Y | A | 0.1721 | |
| 282 | D | A | -0.4074 | |
| 283 | Y | A | 1.0428 | |
| 284 | F | A | 0.8064 | |
| 285 | G | A | 0.0818 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.7692 | |
| 291 | L | A | 1.5743 | |
| 292 | V | A | 0.5604 | |
| 293 | S | A | -0.1682 | |
| 294 | S | A | -0.9678 | |
| 295 | D | A | -1.8449 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1548 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6297 | |
| 301 | R | A | -1.8657 | |
| 302 | P | A | -0.9542 | |
| 303 | F | A | -0.1754 | |
| 304 | W | A | -0.5167 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0826 | |
| 307 | R | A | -2.9248 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6570 | |
| 310 | G | A | -1.4247 | |
| 311 | N | A | -1.3935 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9591 | |
| 319 | N | A | -0.8943 | |
| 320 | E | A | -1.0563 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3980 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2259 | |
| 333 | N | A | 0.4083 | |
| 334 | F | A | 1.5091 | |
| 335 | T | A | 0.8076 | |
| 336 | I | A | 0.4470 | |
| 337 | S | A | -1.0114 | |
| 338 | Q | A | -1.8139 | |
| 339 | Q | A | -1.3248 | |
| 340 | I | A | 0.4626 | |
| 341 | C | A | 0.6113 | |
| 342 | T | A | 0.3897 | |
| 343 | P | A | 0.2004 | |
| 344 | L | A | 1.1237 | |
| 345 | P | A | 0.5776 | |
| 346 | N | A | 0.0059 | |
| 347 | V | A | 1.7121 | |
| 348 | Y | A | 1.6068 | |
| 349 | D | A | 0.2251 | |
| 350 | P | A | -0.5906 | |
| 351 | S | A | -0.4423 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.8968 | |
| 354 | K | A | -2.1045 | |
| 355 | N | A | -1.7701 | |
| 356 | Y | A | 0.0510 | |
| 357 | L | A | 0.6725 | |
| 358 | R | A | 0.9542 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4768 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0087 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8972 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6800 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2810 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3282 | |
| 376 | L | A | -1.7596 | |
| 377 | D | A | -2.0492 | |
| 378 | P | A | -1.0706 | |
| 379 | G | A | -1.0270 | |
| 380 | V | A | -0.9332 | |
| 381 | L | A | -0.5445 | |
| 382 | A | A | -0.6609 | |
| 383 | H | A | -0.8492 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3990 | |
| 386 | T | A | -0.5690 | |
| 387 | M | A | -0.3332 | |
| 388 | N | A | -0.8732 | |
| 389 | P | A | -1.2872 | |
| 390 | T | A | -1.5811 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5371 | |
| 393 | E | A | -3.1217 | |
| 394 | N | A | -2.7505 | |
| 395 | W | A | -1.5064 | |
| 396 | N | A | -1.0744 | |
| 397 | L | A | -0.1468 | |
| 398 | G | A | 0.5735 | |
| 399 | F | A | 2.4500 | |
| 400 | V | A | 2.0682 | |
| 401 | P | A | 0.0844 | |
| 402 | P | A | -1.9707 | |
| 403 | K | A | -3.5029 | |
| 404 | E | A | -4.0136 | |
| 405 | R | A | -4.4635 | |
| 406 | E | A | -4.0118 | |
| 407 | D | A | -2.9640 | |
| 408 | P | A | -1.8132 | |
| 409 | Y | A | -0.9789 | |
| 410 | K | A | -2.0930 | |
| 411 | G | A | -0.6347 | |
| 412 | L | A | 0.6624 | |
| 413 | I | A | 1.5847 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3691 | |
| 416 | E | A | -1.6167 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8241 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8770 | |
| 421 | E | A | -2.4803 | |
| 422 | R | A | -2.0420 | |
| 423 | F | A | -1.0067 | |
| 424 | S | A | -1.3137 | |
| 425 | Q | A | -1.8033 | |
| 426 | D | A | -2.8934 | |
| 427 | L | A | -1.9987 | |
| 428 | D | A | -2.7934 | |
| 429 | Q | A | -2.6242 | |
| 430 | F | A | -1.4675 | |
| 431 | A | A | -0.9201 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6272 | |
| 435 | K | A | -0.7473 | |
| 436 | F | A | 0.1371 | |
| 437 | L | A | 1.0176 | |
| 438 | Y | A | 0.8165 | |
| 439 | Q | A | -0.2707 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine