Project name: 2510-3.pdb

Status: done

Started: 2026-03-11 09:26:38
Settings
Chain sequence(s) H: EVQLQQSGAELAKPGASVKMSCKASGYTFTNFWIHWVKQRPGQGLEWIGYITPTTDYTDYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAIYYCARGSSGYAYWGQGTTLTVSS
L: DIQMIQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPYTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:27)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:29)
Show buried residues

Minimal score value
-3.4714
Maximal score value
1.0734
Average score
-0.6075
Total score value
-135.4655

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.1538
2 V H -1.2710
3 Q H -2.1155
4 L H 0.0000
5 Q H -2.1298
6 Q H 0.0000
7 S H -0.8986
8 G H -0.6793
9 A H 0.0395
11 E H 0.2210
12 L H 0.9634
13 A H -0.3353
14 K H -1.7671
15 P H -1.4355
16 G H -1.1813
17 A H -0.9339
18 S H -0.9105
19 V H -0.5559
20 K H -1.0006
21 M H 0.0000
22 S H -0.5379
23 C H 0.0000
24 K H -1.4233
25 A H 0.0000
26 S H -1.3732
27 G H -1.2526
28 Y H -0.7046
29 T H -0.5291
30 F H 0.0000
35 T H -0.9319
36 N H -1.0734
37 F H -0.1417
38 W H 0.3290
39 I H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -0.8733
45 R H -1.4671
46 P H -1.0590
47 G H -1.3439
48 Q H -1.9319
49 G H -1.3550
50 L H 0.0000
51 E H -1.1085
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 Y H 0.0000
56 I H 0.0000
57 T H 0.0692
58 P H 0.0000
59 T H -0.6444
62 T H -0.2517
63 D H -0.5225
64 Y H 0.8207
65 T H 0.3738
66 D H 0.0090
67 Y H -0.8916
68 N H 0.0000
69 Q H -2.9571
70 K H -3.0650
71 F H 0.0000
72 K H -3.4714
74 D H -3.1945
75 K H -2.1871
76 A H 0.0000
77 T H -0.8837
78 L H 0.0000
79 T H -0.3328
80 A H -0.7135
81 D H -1.4669
82 K H -1.8441
83 S H -1.0778
84 S H -0.9097
85 S H -1.0298
86 T H 0.0000
87 A H 0.0000
88 Y H -0.0700
89 M H 0.0000
90 Q H -0.8539
91 L H 0.0000
92 S H -0.9763
93 S H -0.9932
94 L H 0.0000
95 T H -1.2597
96 S H -1.3644
97 E H -1.9182
98 D H 0.0000
99 S H -0.6062
100 A H 0.0000
101 I H 0.0718
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H -0.0332
107 G H 0.0000
108 S H -0.2523
109 S H 0.0940
114 G H 0.0000
115 Y H 0.0000
116 A H 0.0772
117 Y H 0.1115
118 W H -0.4478
119 G H 0.0000
120 Q H -1.8014
121 G H -0.7817
122 T H 0.0000
123 T H -0.0020
124 L H 0.0000
125 T H -0.0333
126 V H 0.0000
127 S H -0.6880
128 S H -0.7931
1 D L -2.0467
2 I L -1.5180
3 Q L -1.8697
4 M L 0.0000
5 I L -0.0634
6 Q L -0.4761
7 S L -0.4396
8 P L -0.4356
9 S L -0.6615
10 S L -1.0421
11 L L -0.5883
12 S L -0.7822
13 A L 0.0000
14 S L -0.7431
15 L L -0.3418
16 G L -1.2107
17 E L -1.8219
18 R L -2.3157
19 V L 0.0000
20 S L -0.6153
21 L L 0.0000
22 T L -0.6549
23 C L 0.0000
24 R L -2.3899
25 A L 0.0000
26 S L -1.9311
27 Q L -2.8231
28 E L -2.6055
29 I L 0.0000
36 S L -0.6546
37 G L 0.0391
38 Y L 1.0734
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 L L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.5667
46 P L -1.3942
47 D L -2.2581
48 G L -1.5155
49 T L -1.3096
50 I L 0.0000
51 K L -0.7367
52 R L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.5215
56 A L 0.5206
57 A L 0.0000
65 S L -0.2114
66 T L 0.0101
67 L L -0.2187
68 D L -0.3715
69 S L -0.4921
70 G L -0.8270
71 V L 0.0000
72 P L -1.2449
74 K L -1.8914
75 R L -1.5258
76 F L 0.0000
77 S L -0.6029
78 G L -0.4126
79 S L -0.9067
80 R L -1.6407
83 S L -1.2713
84 G L -1.3944
85 S L -1.9311
86 D L -1.5157
87 Y L 0.0000
88 S L -0.8432
89 L L 0.0000
90 T L -0.6170
91 I L 0.0000
92 S L -1.5594
93 S L -1.6516
94 L L 0.0000
95 E L -1.9370
96 S L -1.1773
97 E L -2.1441
98 D L 0.0000
99 F L -0.8893
100 A L 0.0000
101 D L -1.1218
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 Y L 0.8053
108 A L 0.3049
109 S L 0.1761
114 Y L 0.8263
115 P L -0.2539
116 Y L 0.1375
117 T L -0.4955
118 F L 0.0000
119 G L 0.0000
120 G L -0.8660
121 G L 0.0000
122 T L 0.0000
123 K L -1.7111
124 L L 0.0000
125 E L -1.3152
126 I L 0.5761
127 K L -0.9915
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Laboratory of Theory of Biopolymers 2018