| Chain sequence(s) |
A: CKAAGKPCSRIAYNCCTGSCRSGKC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:16)
[INFO] Main: Simulation completed successfully. (00:00:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.4776 | |
| 2 | K | A | -0.4486 | |
| 3 | A | A | -0.6275 | |
| 4 | A | A | -0.9997 | |
| 5 | G | A | -1.9743 | |
| 6 | K | A | -2.6652 | |
| 7 | P | A | -2.1445 | |
| 8 | C | A | 0.0000 | |
| 9 | S | A | -1.2570 | |
| 10 | R | A | -1.6085 | |
| 11 | I | A | 1.0289 | |
| 12 | A | A | 0.6387 | |
| 13 | Y | A | 0.4078 | |
| 14 | N | A | -0.5922 | |
| 15 | C | A | 0.0390 | |
| 16 | C | A | 0.5928 | |
| 17 | T | A | -0.0138 | |
| 18 | G | A | -0.7089 | |
| 19 | S | A | -1.2942 | |
| 20 | C | A | -2.1526 | |
| 21 | R | A | -2.9968 | |
| 22 | S | A | -2.0028 | |
| 23 | G | A | -2.5730 | |
| 24 | K | A | -3.5306 | |
| 25 | C | A | -2.3016 |