Project name: query_structure

Status: done

Started: 2026-03-16 22:59:49
Settings
Chain sequence(s) A: CKAAGKPCSRIAYNCCTGSCRSGKC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:17)
Show buried residues

Minimal score value
-3.5306
Maximal score value
1.0289
Average score
-1.0683
Total score value
-26.707

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.4776
2 K A -0.4486
3 A A -0.6275
4 A A -0.9997
5 G A -1.9743
6 K A -2.6652
7 P A -2.1445
8 C A 0.0000
9 S A -1.2570
10 R A -1.6085
11 I A 1.0289
12 A A 0.6387
13 Y A 0.4078
14 N A -0.5922
15 C A 0.0390
16 C A 0.5928
17 T A -0.0138
18 G A -0.7089
19 S A -1.2942
20 C A -2.1526
21 R A -2.9968
22 S A -2.0028
23 G A -2.5730
24 K A -3.5306
25 C A -2.3016
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Laboratory of Theory of Biopolymers 2018