Project name: 72d686bff45dbd6

Status: done

Started: 2026-02-11 11:35:52
Settings
Chain sequence(s) A: GGKGHFF
C: GGKGHFF
B: GGKGHFF
E: GGKGHFF
D: GGKGHFF
G: GGKGHFF
F: GGKGHFF
I: GGKGHFF
H: GGKGHFF
K: GGKGHFF
J: GGKGHFF
L: GGKGHFF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:20)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:24)
Show buried residues

Minimal score value
-2.9621
Maximal score value
2.74
Average score
-0.3162
Total score value
-26.5632

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.4299
2 G A 0.0000
3 K A -1.8904
4 G A 0.0000
5 H A -0.5676
6 F A 0.0000
7 F A 1.9257
1 G B -0.5106
2 G B 0.0000
3 K B -1.9450
4 G B 0.0000
5 H B -0.6135
6 F B 0.0000
7 F B 1.7571
1 G C -0.9817
2 G C 0.0000
3 K C -2.9621
4 G C 0.0000
5 H C -0.7466
6 F C 0.0000
7 F C 2.1972
1 G D -1.1027
2 G D -1.5419
3 K D -2.9619
4 G D -2.1255
5 H D -0.6761
6 F D 1.4923
7 F D 2.6130
1 G E -0.2236
2 G E -0.4443
3 K E -2.3190
4 G E -2.3238
5 H E -1.3997
6 F E 0.1056
7 F E 1.8715
1 G F -0.6651
2 G F 0.0000
3 K F -2.6350
4 G F 0.0000
5 H F -0.8812
6 F F 0.0000
7 F F 2.4002
1 G G -0.7804
2 G G 0.0000
3 K G -2.1877
4 G G 0.0000
5 H G -0.5878
6 F G 0.0000
7 F G 2.6315
1 G H -0.7569
2 G H 0.0000
3 K H -2.0934
4 G H 0.0000
5 H H -0.4874
6 F H 0.0000
7 F H 2.6738
1 G I -0.7620
2 G I 0.0000
3 K I -2.3724
4 G I 0.0000
5 H I -0.6452
6 F I 0.0000
7 F I 2.7400
1 G J -0.8037
2 G J -1.1436
3 K J -2.5904
4 G J -1.9603
5 H J -0.8846
6 F J 0.8665
7 F J 2.5030
1 G K -0.1130
2 G K -0.2403
3 K K -2.2167
4 G K 0.0000
5 H K -1.3881
6 F K 0.0000
7 F K 1.6260
1 G L -0.5217
2 G L 0.0000
3 K L -2.2206
4 G L 0.0000
5 H L -0.7758
6 F L 0.0000
7 F L 1.5126
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Laboratory of Theory of Biopolymers 2018