| Chain sequence(s) |
A: LTCPEEEDTVKVVGIPGCQTCRYLLVRSLQTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSALNQGQVWIGGRITGSGRCRRFQWVDGSRWNFAYWAAHQPWSRGGHCVALCTRGGHWRRAHCLRRLPFICSY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 87 | L | A | 1.6315 | |
| 88 | T | A | 0.6418 | |
| 89 | C | A | 0.1870 | |
| 90 | P | A | -1.3522 | |
| 91 | E | A | -3.3992 | |
| 92 | E | A | -3.8472 | |
| 93 | E | A | -3.5641 | |
| 94 | D | A | -2.7443 | |
| 95 | T | A | -2.1947 | |
| 96 | V | A | -0.8679 | |
| 97 | K | A | -1.3822 | |
| 98 | V | A | 0.0000 | |
| 99 | V | A | 0.4471 | |
| 100 | G | A | -0.4054 | |
| 101 | I | A | 0.0000 | |
| 102 | P | A | -0.5134 | |
| 103 | G | A | -0.4619 | |
| 104 | C | A | -0.4332 | |
| 105 | Q | A | -1.0976 | |
| 106 | T | A | -0.6184 | |
| 107 | C | A | -0.3639 | |
| 108 | R | A | -0.9175 | |
| 109 | Y | A | 0.0000 | |
| 110 | L | A | 0.0000 | |
| 111 | L | A | 0.0000 | |
| 112 | V | A | 0.0000 | |
| 113 | R | A | -1.4765 | |
| 114 | S | A | -0.8043 | |
| 115 | L | A | -0.5879 | |
| 116 | Q | A | -0.8022 | |
| 117 | T | A | -0.7525 | |
| 118 | F | A | 0.0000 | |
| 119 | S | A | 0.2947 | |
| 120 | Q | A | 0.0855 | |
| 121 | A | A | 0.0000 | |
| 122 | W | A | 0.0836 | |
| 123 | F | A | 0.4752 | |
| 124 | T | A | 0.0000 | |
| 125 | C | A | 0.0000 | |
| 126 | R | A | -2.1373 | |
| 127 | R | A | -1.9445 | |
| 128 | C | A | -0.7044 | |
| 129 | Y | A | -1.0711 | |
| 130 | R | A | -2.4408 | |
| 131 | G | A | -1.5281 | |
| 132 | N | A | -1.1670 | |
| 133 | L | A | 0.0000 | |
| 134 | V | A | 0.0000 | |
| 135 | S | A | -0.7733 | |
| 136 | I | A | 0.0000 | |
| 137 | H | A | -0.7133 | |
| 138 | N | A | 0.1810 | |
| 139 | F | A | 1.5923 | |
| 140 | N | A | 0.2288 | |
| 141 | I | A | 0.0000 | |
| 142 | N | A | 0.0000 | |
| 143 | Y | A | 1.0243 | |
| 144 | R | A | 0.3137 | |
| 145 | I | A | 0.0000 | |
| 146 | Q | A | -0.3237 | |
| 147 | C | A | 0.1471 | |
| 148 | S | A | 0.1730 | |
| 149 | V | A | 0.0000 | |
| 150 | S | A | -0.8558 | |
| 151 | A | A | -0.5016 | |
| 152 | L | A | 0.0000 | |
| 153 | N | A | -1.5573 | |
| 154 | Q | A | -1.4241 | |
| 155 | G | A | -1.1220 | |
| 156 | Q | A | -1.2115 | |
| 157 | V | A | 0.0000 | |
| 158 | W | A | 0.0000 | |
| 159 | I | A | 0.0000 | |
| 160 | G | A | 0.0000 | |
| 161 | G | A | 0.0000 | |
| 162 | R | A | -1.7584 | |
| 163 | I | A | -1.8061 | |
| 164 | T | A | -1.6219 | |
| 165 | G | A | -2.1683 | |
| 166 | S | A | -1.5910 | |
| 167 | G | A | -2.0001 | |
| 168 | R | A | -2.2235 | |
| 169 | C | A | -1.6951 | |
| 170 | R | A | -3.0434 | |
| 171 | R | A | -2.7910 | |
| 172 | F | A | -1.7720 | |
| 173 | Q | A | -1.9738 | |
| 174 | W | A | 0.0000 | |
| 175 | V | A | -1.1499 | |
| 176 | D | A | -1.8636 | |
| 177 | G | A | -1.6406 | |
| 178 | S | A | -1.8114 | |
| 179 | R | A | -2.4567 | |
| 180 | W | A | -1.6408 | |
| 181 | N | A | -1.6687 | |
| 182 | F | A | -0.3486 | |
| 183 | A | A | 0.1643 | |
| 184 | Y | A | 0.3749 | |
| 185 | W | A | -0.1807 | |
| 186 | A | A | -0.5011 | |
| 187 | A | A | -0.5802 | |
| 188 | H | A | -1.0296 | |
| 189 | Q | A | -0.8915 | |
| 190 | P | A | -0.3591 | |
| 191 | W | A | 0.1513 | |
| 192 | S | A | -0.9403 | |
| 193 | R | A | -2.1135 | |
| 194 | G | A | -1.8444 | |
| 195 | G | A | 0.0000 | |
| 196 | H | A | -1.7668 | |
| 197 | C | A | 0.0000 | |
| 198 | V | A | 0.0000 | |
| 199 | A | A | 0.0000 | |
| 200 | L | A | 0.0000 | |
| 201 | C | A | -1.0335 | |
| 202 | T | A | 0.0000 | |
| 203 | R | A | -2.2040 | |
| 204 | G | A | -1.3148 | |
| 205 | G | A | 0.0000 | |
| 206 | H | A | -0.7597 | |
| 207 | W | A | 0.0000 | |
| 208 | R | A | -0.9899 | |
| 209 | R | A | -1.4100 | |
| 210 | A | A | 0.0000 | |
| 211 | H | A | -1.5211 | |
| 212 | C | A | -0.8618 | |
| 213 | L | A | 0.0490 | |
| 214 | R | A | -1.5854 | |
| 215 | R | A | -1.9943 | |
| 216 | L | A | 0.0000 | |
| 217 | P | A | 0.0000 | |
| 218 | F | A | 0.0000 | |
| 219 | I | A | 0.0000 | |
| 220 | C | A | 0.0000 | |
| 221 | S | A | -0.6264 | |
| 222 | Y | A | -0.2032 |