| Chain sequence(s) |
A: CGETCFGGTCNTPGCSCTWPICTRDGLPV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:11)
[INFO] Main: Simulation completed successfully. (00:00:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.4096 | |
| 2 | G | A | 0.1285 | |
| 3 | E | A | 0.0979 | |
| 4 | T | A | 0.5718 | |
| 5 | C | A | 0.0000 | |
| 6 | F | A | 1.9217 | |
| 7 | G | A | 0.4924 | |
| 8 | G | A | 0.4187 | |
| 9 | T | A | -0.0459 | |
| 10 | C | A | -0.5648 | |
| 11 | N | A | -1.4129 | |
| 12 | T | A | -1.1328 | |
| 13 | P | A | -0.9880 | |
| 14 | G | A | -1.5712 | |
| 15 | C | A | -1.1327 | |
| 16 | S | A | -0.7480 | |
| 17 | C | A | 0.4944 | |
| 18 | T | A | 0.8663 | |
| 19 | W | A | 1.5982 | |
| 20 | P | A | 1.1973 | |
| 21 | I | A | 1.2750 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | 0.0000 | |
| 24 | R | A | -1.6688 | |
| 25 | D | A | -2.1298 | |
| 26 | G | A | -0.9374 | |
| 27 | L | A | 0.5832 | |
| 28 | P | A | 0.6445 | |
| 29 | V | A | 1.5220 |