| Chain sequence(s) |
L: KYYMNSFTPPYD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:16)
[INFO] Main: Simulation completed successfully. (00:00:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 51 | K | L | -1.4570 | |
| 52 | Y | L | 1.2438 | |
| 53 | Y | L | 1.6364 | |
| 54 | M | L | 0.5370 | |
| 55 | N | L | -0.9119 | |
| 56 | S | L | -0.0384 | |
| 57 | F | L | 1.8955 | |
| 58 | T | L | 0.2711 | |
| 59 | P | L | -0.2748 | |
| 60 | P | L | 0.2722 | |
| 61 | Y | L | 0.8602 | |
| 62 | D | L | -1.4646 |