| Chain sequence(s) |
B: LAAMKELKERLKKAKEIMMKMAELASPEVVEKAKEFAKKMDEKFAKIVAA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:50)
[INFO] Main: Simulation completed successfully. (00:02:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 1.2386 | |
| 2 | A | B | 0.1445 | |
| 3 | A | B | -0.0384 | |
| 4 | M | B | -0.3914 | |
| 5 | K | B | -2.3602 | |
| 6 | E | B | -2.7815 | |
| 7 | L | B | -1.7704 | |
| 8 | K | B | -3.2985 | |
| 9 | E | B | -4.6377 | |
| 10 | R | B | -4.4436 | |
| 11 | L | B | -3.3970 | |
| 12 | K | B | -4.4082 | |
| 13 | K | B | -4.0211 | |
| 14 | A | B | -2.4997 | |
| 15 | K | B | -2.5884 | |
| 16 | E | B | -2.6529 | |
| 17 | I | B | -0.8982 | |
| 18 | M | B | -0.4636 | |
| 19 | M | B | -1.4265 | |
| 20 | K | B | -0.9443 | |
| 21 | M | B | 0.4619 | |
| 22 | A | B | 0.0000 | |
| 23 | E | B | -1.3690 | |
| 24 | L | B | 0.8088 | |
| 25 | A | B | 0.1462 | |
| 26 | S | B | -0.9397 | |
| 27 | P | B | -1.8527 | |
| 28 | E | B | -3.0639 | |
| 29 | V | B | -1.9293 | |
| 30 | V | B | 0.0000 | |
| 31 | E | B | -4.1087 | |
| 32 | K | B | -3.7196 | |
| 33 | A | B | 0.0000 | |
| 34 | K | B | -3.8403 | |
| 35 | E | B | -3.8979 | |
| 36 | F | B | -1.9684 | |
| 37 | A | B | -3.2207 | |
| 38 | K | B | -4.2421 | |
| 39 | K | B | -3.9150 | |
| 40 | M | B | -2.9796 | |
| 41 | D | B | -3.7987 | |
| 42 | E | B | -3.9957 | |
| 43 | K | B | -3.5169 | |
| 44 | F | B | -1.7543 | |
| 45 | A | B | -1.7139 | |
| 46 | K | B | -1.8732 | |
| 47 | I | B | 0.2141 | |
| 48 | V | B | 0.5243 | |
| 49 | A | B | 0.1002 | |
| 50 | A | B | 0.3168 |