Project name: 73330e5c98c829c

Status: done

Started: 2026-06-22 16:06:20
Settings
Chain sequence(s) B: LAAMKELKERLKKAKEIMMKMAELASPEVVEKAKEFAKKMDEKFAKIVAA
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:50)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:50)
Show buried residues

Minimal score value
-4.6377
Maximal score value
1.2386
Average score
-1.9353
Total score value
-96.7658

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L B 1.2386
2 A B 0.1445
3 A B -0.0384
4 M B -0.3914
5 K B -2.3602
6 E B -2.7815
7 L B -1.7704
8 K B -3.2985
9 E B -4.6377
10 R B -4.4436
11 L B -3.3970
12 K B -4.4082
13 K B -4.0211
14 A B -2.4997
15 K B -2.5884
16 E B -2.6529
17 I B -0.8982
18 M B -0.4636
19 M B -1.4265
20 K B -0.9443
21 M B 0.4619
22 A B 0.0000
23 E B -1.3690
24 L B 0.8088
25 A B 0.1462
26 S B -0.9397
27 P B -1.8527
28 E B -3.0639
29 V B -1.9293
30 V B 0.0000
31 E B -4.1087
32 K B -3.7196
33 A B 0.0000
34 K B -3.8403
35 E B -3.8979
36 F B -1.9684
37 A B -3.2207
38 K B -4.2421
39 K B -3.9150
40 M B -2.9796
41 D B -3.7987
42 E B -3.9957
43 K B -3.5169
44 F B -1.7543
45 A B -1.7139
46 K B -1.8732
47 I B 0.2141
48 V B 0.5243
49 A B 0.1002
50 A B 0.3168
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Laboratory of Theory of Biopolymers 2018