| Chain sequence(s) |
A: GPLALDPAPPLLPTSEYVTPTDLLYYAETDEITETGNPTADIVVNGKVLVPKVSAWQYKLFKLTLPDPNTLPLPSADALDPATEIRIWRLRAIYIGVGGPLGKGTYGHDNFNALGDVDNPTAPQHEGADDTVALSWTPKYLQSFVVGDLPPLGVYTAPAAPEPGLPPGALPPLERRHGLIEHGDMADIGFGARDYAALLPEKDRVPDIIRDTSTKVLDLERMRAEPTGRRMFTYDFKEQSKPVKKYRYAGPDLLPLPNTPPPSPLYTPPPPTSPYAVLPPYRLFELPDAGEITESQELFNRPYFFEKTEGLNDGILWHNQLYILVVDNSRATIETIRTRISTPPDEVYDPENYVTSRRYTETYKISLIVQLCRIPLTPETRALLARIDPSILVDARLPDVPPVERADPLAGKKFKELDLTDKLTSDLETSELGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1578 | |
| 2 | P | A | 0.4844 | |
| 3 | L | A | 1.5322 | |
| 4 | A | A | 0.8670 | |
| 5 | L | A | 1.0687 | |
| 6 | D | A | -0.9659 | |
| 7 | P | A | -0.7424 | |
| 8 | A | A | -0.5442 | |
| 9 | P | A | -0.8269 | |
| 10 | P | A | -0.1783 | |
| 11 | L | A | 0.3309 | |
| 12 | L | A | 0.3566 | |
| 13 | P | A | -0.1521 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -1.1868 | |
| 16 | E | A | -1.7505 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.6625 | |
| 20 | P | A | -0.7553 | |
| 21 | T | A | -0.9714 | |
| 22 | D | A | -1.6420 | |
| 23 | L | A | -0.4937 | |
| 24 | L | A | -0.2017 | |
| 25 | Y | A | -0.1641 | |
| 26 | Y | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.4093 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -3.2414 | |
| 31 | E | A | -3.1057 | |
| 32 | I | A | 0.0000 | |
| 33 | T | A | -0.9979 | |
| 34 | E | A | -0.3597 | |
| 35 | T | A | -0.3493 | |
| 36 | G | A | 0.0000 | |
| 37 | N | A | -0.7774 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -0.6965 | |
| 40 | A | A | -0.6183 | |
| 41 | D | A | -0.0330 | |
| 42 | I | A | 1.7317 | |
| 43 | V | A | 2.4898 | |
| 44 | V | A | 1.6563 | |
| 45 | N | A | -0.5433 | |
| 46 | G | A | -0.3581 | |
| 47 | K | A | -0.1301 | |
| 48 | V | A | 2.1418 | |
| 49 | L | A | 2.4965 | |
| 50 | V | A | 1.3953 | |
| 51 | P | A | 0.2495 | |
| 52 | K | A | -0.5015 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | L | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | -1.3756 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.3681 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | -0.9497 | |
| 67 | D | A | -0.6204 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.8852 | |
| 70 | T | A | -0.2007 | |
| 71 | L | A | 0.0176 | |
| 72 | P | A | -0.1675 | |
| 73 | L | A | -0.0722 | |
| 74 | P | A | -0.3464 | |
| 75 | S | A | -0.3660 | |
| 76 | A | A | -0.2457 | |
| 77 | D | A | -0.7184 | |
| 78 | A | A | -0.4461 | |
| 79 | L | A | -0.7278 | |
| 80 | D | A | -1.4107 | |
| 81 | P | A | -1.1838 | |
| 82 | A | A | -0.8018 | |
| 83 | T | A | -0.5886 | |
| 84 | E | A | -0.7776 | |
| 85 | I | A | 0.0000 | |
| 86 | R | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.3503 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.7273 | |
| 92 | A | A | 0.0000 | |
| 93 | I | A | 0.0000 | |
| 94 | Y | A | -0.4530 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -0.9720 | |
| 97 | V | A | 0.0000 | |
| 98 | G | A | -0.8984 | |
| 99 | G | A | -0.6297 | |
| 100 | P | A | -0.4435 | |
| 101 | L | A | -0.3273 | |
| 102 | G | A | -0.5768 | |
| 103 | K | A | -1.0412 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.2836 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.9034 | |
| 108 | H | A | 0.0000 | |
| 109 | D | A | -2.2800 | |
| 110 | N | A | -2.3725 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | -0.4402 | |
| 115 | G | A | -0.6730 | |
| 116 | D | A | -1.4200 | |
| 117 | V | A | -1.4853 | |
| 118 | D | A | -2.9019 | |
| 119 | N | A | -2.4472 | |
| 120 | P | A | -1.3946 | |
| 121 | T | A | -0.7363 | |
| 122 | A | A | -0.2920 | |
| 123 | P | A | 0.0171 | |
| 124 | Q | A | -0.5230 | |
| 125 | H | A | -1.0428 | |
| 126 | E | A | -2.0826 | |
| 127 | G | A | -1.9215 | |
| 128 | A | A | -1.4018 | |
| 129 | D | A | -2.3042 | |
| 130 | D | A | -1.6133 | |
| 131 | T | A | -1.0835 | |
| 132 | V | A | -0.2690 | |
| 133 | A | A | -0.7291 | |
| 134 | L | A | -0.3667 | |
| 135 | S | A | -0.3999 | |
| 136 | W | A | 0.0000 | |
| 137 | T | A | -0.2544 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Y | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | S | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | V | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | 0.1378 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.1181 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | 0.0000 | |
| 155 | Y | A | -1.1013 | |
| 156 | T | A | -1.2894 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | -0.0993 | |
| 159 | A | A | -0.5715 | |
| 160 | A | A | -0.5188 | |
| 161 | P | A | -0.8775 | |
| 162 | E | A | -2.0526 | |
| 163 | P | A | -1.3074 | |
| 164 | G | A | -0.9121 | |
| 165 | L | A | -0.2792 | |
| 166 | P | A | -0.1807 | |
| 167 | P | A | -0.3229 | |
| 168 | G | A | 0.0653 | |
| 169 | A | A | 0.7333 | |
| 170 | L | A | 1.8201 | |
| 171 | P | A | 0.5184 | |
| 172 | P | A | 0.3695 | |
| 173 | L | A | 0.4156 | |
| 174 | E | A | -1.5110 | |
| 175 | R | A | -2.5287 | |
| 176 | R | A | -2.0492 | |
| 177 | H | A | -1.2492 | |
| 178 | G | A | -0.3024 | |
| 179 | L | A | -0.2026 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.2370 | |
| 182 | H | A | -1.3964 | |
| 183 | G | A | -0.8146 | |
| 184 | D | A | -0.7500 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.7059 | |
| 190 | F | A | -0.3716 | |
| 191 | G | A | -0.2500 | |
| 192 | A | A | -0.4739 | |
| 193 | R | A | -1.0029 | |
| 194 | D | A | -0.9253 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.3139 | |
| 197 | A | A | -0.6301 | |
| 198 | L | A | -0.1688 | |
| 199 | L | A | -1.2642 | |
| 200 | P | A | -1.6580 | |
| 201 | E | A | -2.5667 | |
| 202 | K | A | -2.8742 | |
| 203 | D | A | -2.2132 | |
| 204 | R | A | -1.4984 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.7736 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -2.2341 | |
| 211 | D | A | -2.3308 | |
| 212 | T | A | -1.3384 | |
| 213 | S | A | -0.8546 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | -0.1500 | |
| 216 | V | A | 0.6180 | |
| 217 | L | A | 0.3368 | |
| 218 | D | A | 0.0000 | |
| 219 | L | A | -1.3890 | |
| 220 | E | A | -2.8889 | |
| 221 | R | A | -2.6984 | |
| 222 | M | A | 0.0000 | |
| 223 | R | A | -3.2693 | |
| 224 | A | A | -1.9736 | |
| 225 | E | A | -1.5811 | |
| 226 | P | A | -0.6090 | |
| 227 | T | A | -0.3132 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.5979 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.7168 | |
| 234 | Y | A | -0.0443 | |
| 235 | D | A | -0.0596 | |
| 236 | F | A | 0.3231 | |
| 237 | K | A | -1.0321 | |
| 238 | E | A | -1.8194 | |
| 239 | Q | A | -1.9358 | |
| 240 | S | A | -1.7010 | |
| 241 | K | A | -1.9610 | |
| 242 | P | A | -1.4925 | |
| 243 | V | A | -0.6346 | |
| 244 | K | A | -2.0490 | |
| 245 | K | A | -2.0360 | |
| 246 | Y | A | -0.9851 | |
| 247 | R | A | 0.0904 | |
| 248 | Y | A | 0.1879 | |
| 249 | A | A | -0.7353 | |
| 250 | G | A | -0.4054 | |
| 251 | P | A | -0.0051 | |
| 252 | D | A | 0.9200 | |
| 253 | L | A | 2.2518 | |
| 254 | L | A | 2.2495 | |
| 255 | P | A | 0.9765 | |
| 256 | L | A | 1.0906 | |
| 257 | P | A | -0.0587 | |
| 258 | N | A | -0.8380 | |
| 259 | T | A | -0.6373 | |
| 260 | P | A | -0.8408 | |
| 261 | P | A | -0.7540 | |
| 262 | P | A | -0.3342 | |
| 263 | S | A | -0.0576 | |
| 264 | P | A | 0.4081 | |
| 265 | L | A | 1.4512 | |
| 266 | Y | A | 0.7509 | |
| 267 | T | A | -0.0146 | |
| 268 | P | A | 0.0884 | |
| 269 | P | A | 0.2833 | |
| 270 | P | A | -0.2877 | |
| 271 | P | A | -0.0211 | |
| 272 | T | A | 0.0270 | |
| 273 | S | A | 0.3618 | |
| 274 | P | A | 0.5719 | |
| 275 | Y | A | 1.6616 | |
| 276 | A | A | 1.2147 | |
| 277 | V | A | 1.8423 | |
| 278 | L | A | 1.2584 | |
| 279 | P | A | 0.3877 | |
| 280 | P | A | 0.0000 | |
| 281 | Y | A | 1.1194 | |
| 282 | R | A | 0.7326 | |
| 283 | L | A | 1.1324 | |
| 284 | F | A | 0.0000 | |
| 285 | E | A | -2.1015 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.2247 | |
| 289 | A | A | 0.0000 | |
| 290 | G | A | -1.4055 | |
| 291 | E | A | -1.9572 | |
| 292 | I | A | -1.2767 | |
| 293 | T | A | -1.3733 | |
| 294 | E | A | -1.9725 | |
| 295 | S | A | -1.3116 | |
| 296 | Q | A | -1.3917 | |
| 297 | E | A | -1.0637 | |
| 298 | L | A | 0.0000 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.0755 | |
| 301 | R | A | -0.8861 | |
| 302 | P | A | -0.3310 | |
| 303 | Y | A | -0.0063 | |
| 304 | F | A | -0.3715 | |
| 305 | F | A | 0.0000 | |
| 306 | E | A | -2.6114 | |
| 307 | K | A | -2.9869 | |
| 308 | T | A | 0.0000 | |
| 309 | E | A | -2.4623 | |
| 310 | G | A | -1.5616 | |
| 311 | L | A | -0.3376 | |
| 312 | N | A | 0.0000 | |
| 313 | D | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.4242 | |
| 319 | N | A | -0.5443 | |
| 320 | Q | A | -0.5077 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | L | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | -0.4185 | |
| 331 | A | A | 0.0000 | |
| 332 | T | A | -0.7720 | |
| 333 | I | A | -0.9392 | |
| 334 | E | A | -1.7490 | |
| 335 | T | A | -0.9282 | |
| 336 | I | A | 0.1335 | |
| 337 | R | A | -0.4777 | |
| 338 | T | A | -0.0634 | |
| 339 | R | A | -0.9141 | |
| 340 | I | A | 1.0638 | |
| 341 | S | A | 0.0397 | |
| 342 | T | A | -0.4224 | |
| 343 | P | A | -0.8869 | |
| 344 | P | A | -0.9415 | |
| 345 | D | A | -1.3263 | |
| 346 | E | A | -1.2329 | |
| 347 | V | A | 1.0224 | |
| 348 | Y | A | 0.8655 | |
| 349 | D | A | -0.7188 | |
| 350 | P | A | -1.0244 | |
| 351 | E | A | -1.6426 | |
| 352 | N | A | -0.9232 | |
| 353 | Y | A | 0.0288 | |
| 354 | V | A | 1.1816 | |
| 355 | T | A | 0.2457 | |
| 356 | S | A | -0.3306 | |
| 357 | R | A | -1.3166 | |
| 358 | R | A | -1.1376 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.5682 | |
| 361 | E | A | 0.0000 | |
| 362 | T | A | -0.8852 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -2.1277 | |
| 365 | I | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -0.5287 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.7415 | |
| 376 | L | A | -0.5968 | |
| 377 | T | A | -0.9204 | |
| 378 | P | A | -1.3067 | |
| 379 | E | A | -2.1197 | |
| 380 | T | A | 0.0000 | |
| 381 | R | A | -1.2594 | |
| 382 | A | A | -1.1628 | |
| 383 | L | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | A | A | -0.6749 | |
| 386 | R | A | -1.1520 | |
| 387 | I | A | -0.4354 | |
| 388 | D | A | -0.5555 | |
| 389 | P | A | -0.5928 | |
| 390 | S | A | -0.4012 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -0.3345 | |
| 393 | V | A | -0.6361 | |
| 394 | D | A | -1.1977 | |
| 395 | A | A | -1.1772 | |
| 396 | R | A | -2.0803 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | -1.5634 | |
| 399 | D | A | -2.0462 | |
| 400 | V | A | -0.7977 | |
| 401 | P | A | -0.5829 | |
| 402 | P | A | -0.5582 | |
| 403 | V | A | 0.3777 | |
| 404 | E | A | -1.4934 | |
| 405 | R | A | -1.4103 | |
| 406 | A | A | -1.0712 | |
| 407 | D | A | -1.6039 | |
| 408 | P | A | -0.9444 | |
| 409 | L | A | -0.8439 | |
| 410 | A | A | -1.0367 | |
| 411 | G | A | -1.3814 | |
| 412 | K | A | -1.8814 | |
| 413 | K | A | -2.6356 | |
| 414 | F | A | -1.7987 | |
| 415 | K | A | -1.9421 | |
| 416 | E | A | -2.6621 | |
| 417 | L | A | -2.0132 | |
| 418 | D | A | -2.8541 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.6229 | |
| 421 | D | A | -2.3416 | |
| 422 | K | A | -1.9422 | |
| 423 | L | A | -0.7820 | |
| 424 | T | A | -0.7407 | |
| 425 | S | A | -0.7652 | |
| 426 | D | A | -1.8944 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -2.8739 | |
| 429 | T | A | -2.0736 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -2.6044 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -3.0155 | |
| 435 | L | A | -1.3862 | |
| 436 | Y | A | -0.9504 | |
| 437 | L | A | -0.5980 | |
| 438 | N | A | -1.7805 | |
| 439 | R | A | -2.0470 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine