Chain sequence(s) |
A: MAVLVLLFCLVTFPSCVLSQVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWSGGSTDYNAAFISRLSISKDNSKSQVFFKMNSLQADDTAIYYCAK
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:06) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:07) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:07) [INFO] runJob: Creating pdb object from: input.pdb (00:00:07) [INFO] FoldX: Starting FoldX energy minimalization (00:00:07) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:42) [INFO] Main: Simulation completed successfully. (00:00:43) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | M | A | 2.3856 | |
2 | A | A | 2.6856 | |
3 | V | A | 4.0345 | |
4 | L | A | 4.1760 | |
5 | V | A | 5.0530 | |
6 | L | A | 5.2501 | |
7 | L | A | 5.1246 | |
8 | F | A | 5.6431 | |
9 | C | A | 4.6874 | |
10 | L | A | 4.6277 | |
11 | V | A | 4.2049 | |
12 | T | A | 2.9102 | |
13 | F | A | 3.0762 | |
14 | P | A | 1.5618 | |
15 | S | A | 1.6627 | |
16 | C | A | 2.1839 | |
17 | V | A | 2.5245 | |
18 | L | A | 2.2427 | |
19 | S | A | 0.6045 | |
20 | Q | A | -0.5313 | |
21 | V | A | -0.3082 | |
22 | Q | A | -1.6368 | |
23 | L | A | -1.2122 | |
24 | K | A | -2.1332 | |
25 | Q | A | -1.5057 | |
26 | S | A | -1.1552 | |
27 | G | A | -0.6264 | |
28 | P | A | -0.1458 | |
29 | G | A | 0.1357 | |
30 | L | A | 1.0885 | |
31 | V | A | -0.0513 | |
32 | Q | A | -1.3745 | |
33 | P | A | -1.7926 | |
34 | S | A | -1.7156 | |
35 | Q | A | -2.1395 | |
36 | S | A | -1.9570 | |
37 | L | A | 0.0000 | |
38 | S | A | -1.0392 | |
39 | I | A | 0.0000 | |
40 | T | A | -0.7764 | |
41 | C | A | 0.0000 | |
42 | T | A | -1.3322 | |
43 | V | A | 0.0000 | |
44 | S | A | -0.8415 | |
45 | G | A | -0.4343 | |
46 | F | A | -0.1931 | |
47 | S | A | -0.2606 | |
48 | L | A | 0.0000 | |
49 | T | A | -0.3473 | |
50 | S | A | 0.2464 | |
51 | Y | A | 0.5907 | |
52 | G | A | -0.0370 | |
53 | V | A | 0.0000 | |
54 | H | A | -0.4505 | |
55 | W | A | 0.0000 | |
56 | V | A | 0.9183 | |
57 | R | A | 0.0000 | |
58 | Q | A | 0.2452 | |
59 | P | A | 0.0000 | |
60 | P | A | -1.0388 | |
61 | G | A | -1.5594 | |
62 | K | A | -2.0637 | |
63 | G | A | -0.8796 | |
64 | L | A | 0.9674 | |
65 | E | A | -0.0246 | |
66 | W | A | 0.5067 | |
67 | L | A | 0.0000 | |
68 | G | A | 0.0000 | |
69 | V | A | 0.0000 | |
70 | I | A | 0.0000 | |
71 | W | A | -0.0043 | |
72 | S | A | -0.0588 | |
73 | G | A | -0.4056 | |
74 | G | A | -0.6977 | |
75 | S | A | -0.6104 | |
76 | T | A | -0.7426 | |
77 | D | A | -0.9301 | |
78 | Y | A | 0.1110 | |
79 | N | A | 0.1608 | |
80 | A | A | 0.4793 | |
81 | A | A | 0.4753 | |
82 | F | A | 0.0000 | |
83 | I | A | 1.5620 | |
84 | S | A | 0.3496 | |
85 | R | A | -0.6195 | |
86 | L | A | 0.0000 | |
87 | S | A | -0.5345 | |
88 | I | A | 0.0000 | |
89 | S | A | -0.6627 | |
90 | K | A | -1.1846 | |
91 | D | A | -1.8479 | |
92 | N | A | -2.3720 | |
93 | S | A | -1.8812 | |
94 | K | A | -2.4929 | |
95 | S | A | -1.7532 | |
96 | Q | A | -1.6122 | |
97 | V | A | 0.0000 | |
98 | F | A | -0.3406 | |
99 | F | A | 0.0000 | |
100 | K | A | -1.7494 | |
101 | M | A | 0.0000 | |
102 | N | A | -2.3958 | |
103 | S | A | -1.8115 | |
104 | L | A | 0.0000 | |
105 | Q | A | -2.4171 | |
106 | A | A | -1.6481 | |
107 | D | A | -2.2303 | |
108 | D | A | 0.0000 | |
109 | T | A | -0.3357 | |
110 | A | A | 0.4199 | |
111 | I | A | 2.1824 | |
112 | Y | A | 1.2792 | |
113 | Y | A | 0.8521 | |
114 | C | A | 0.0000 | |
115 | A | A | -0.8083 | |
116 | K | A | -1.4006 |