Project name: 7381b61bd751647

Status: done

Started: 2024-07-03 02:56:35
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Chain sequence(s) A: MAVLVLLFCLVTFPSCVLSQVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWSGGSTDYNAAFISRLSISKDNSKSQVFFKMNSLQADDTAIYYCAK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:06)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:07)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:07)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:07)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:07)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:43)
Show buried residues

Minimal score value
-2.4929
Maximal score value
5.6431
Average score
0.1215
Total score value
14.0984

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 2.3856
2 A A 2.6856
3 V A 4.0345
4 L A 4.1760
5 V A 5.0530
6 L A 5.2501
7 L A 5.1246
8 F A 5.6431
9 C A 4.6874
10 L A 4.6277
11 V A 4.2049
12 T A 2.9102
13 F A 3.0762
14 P A 1.5618
15 S A 1.6627
16 C A 2.1839
17 V A 2.5245
18 L A 2.2427
19 S A 0.6045
20 Q A -0.5313
21 V A -0.3082
22 Q A -1.6368
23 L A -1.2122
24 K A -2.1332
25 Q A -1.5057
26 S A -1.1552
27 G A -0.6264
28 P A -0.1458
29 G A 0.1357
30 L A 1.0885
31 V A -0.0513
32 Q A -1.3745
33 P A -1.7926
34 S A -1.7156
35 Q A -2.1395
36 S A -1.9570
37 L A 0.0000
38 S A -1.0392
39 I A 0.0000
40 T A -0.7764
41 C A 0.0000
42 T A -1.3322
43 V A 0.0000
44 S A -0.8415
45 G A -0.4343
46 F A -0.1931
47 S A -0.2606
48 L A 0.0000
49 T A -0.3473
50 S A 0.2464
51 Y A 0.5907
52 G A -0.0370
53 V A 0.0000
54 H A -0.4505
55 W A 0.0000
56 V A 0.9183
57 R A 0.0000
58 Q A 0.2452
59 P A 0.0000
60 P A -1.0388
61 G A -1.5594
62 K A -2.0637
63 G A -0.8796
64 L A 0.9674
65 E A -0.0246
66 W A 0.5067
67 L A 0.0000
68 G A 0.0000
69 V A 0.0000
70 I A 0.0000
71 W A -0.0043
72 S A -0.0588
73 G A -0.4056
74 G A -0.6977
75 S A -0.6104
76 T A -0.7426
77 D A -0.9301
78 Y A 0.1110
79 N A 0.1608
80 A A 0.4793
81 A A 0.4753
82 F A 0.0000
83 I A 1.5620
84 S A 0.3496
85 R A -0.6195
86 L A 0.0000
87 S A -0.5345
88 I A 0.0000
89 S A -0.6627
90 K A -1.1846
91 D A -1.8479
92 N A -2.3720
93 S A -1.8812
94 K A -2.4929
95 S A -1.7532
96 Q A -1.6122
97 V A 0.0000
98 F A -0.3406
99 F A 0.0000
100 K A -1.7494
101 M A 0.0000
102 N A -2.3958
103 S A -1.8115
104 L A 0.0000
105 Q A -2.4171
106 A A -1.6481
107 D A -2.2303
108 D A 0.0000
109 T A -0.3357
110 A A 0.4199
111 I A 2.1824
112 Y A 1.2792
113 Y A 0.8521
114 C A 0.0000
115 A A -0.8083
116 K A -1.4006
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Laboratory of Theory of Biopolymers 2018