Project name: 497

Status: done

Started: 2025-06-25 13:31:57
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Chain sequence(s) H: EVQLVESGGGLVQPGGSLRLSCTASGYTNRLKCMGWFRQAPGKEREEIATISTGTGNTYYADSVKGRFTFSRDNSKNTLYLQMNSLRAEDTAVYYCAADVRPDGTTCHYNSGGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:34)
Show buried residues

Minimal score value
-3.6672
Maximal score value
1.1179
Average score
-0.8575
Total score value
-104.6151

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.5532
2 V H -0.1738
3 Q H -0.5190
4 L H 0.0000
5 V H 0.9936
6 E H 0.1234
7 S H -0.6082
8 G H -1.1491
9 G H -0.6642
11 G H 0.2926
12 L H 1.1179
13 V H 0.0301
14 Q H -1.2865
15 P H -1.6296
16 G H -1.3016
17 G H -0.9056
18 S H -1.1695
19 L H -0.8515
20 R H -2.0180
21 L H 0.0000
22 S H -0.3623
23 C H 0.0000
24 T H -0.2254
25 A H 0.0000
26 S H -0.5584
27 G H -1.0284
28 Y H -0.9628
29 T H -1.2264
30 N H -2.5231
35 R H -2.6913
36 L H 0.0000
37 K H -1.8162
38 C H -0.8379
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H -0.6762
43 R H 0.0000
44 Q H -1.9754
45 A H -1.8090
46 P H -1.2589
47 G H -1.9511
48 K H -3.3690
49 E H -3.6672
50 R H -2.9615
51 E H -2.2422
52 E H -1.0815
53 I H 0.0000
54 A H 0.0000
55 T H 0.3082
56 I H 0.0000
57 S H -0.7512
58 T H -1.5491
59 G H -1.2046
62 T H -0.7470
63 G H -0.8672
64 N H -0.9915
65 T H 0.0724
66 Y H 0.7034
67 Y H -0.3035
68 A H -1.1947
69 D H -2.3568
70 S H -1.7585
71 V H 0.0000
72 K H -2.4274
74 G H -1.8016
75 R H -1.5866
76 F H 0.0000
77 T H -0.6920
78 F H 0.0000
79 S H -0.6715
80 R H -1.3916
81 D H -2.0345
82 N H -2.6271
83 S H -1.9967
84 K H -2.6926
85 N H -2.2753
86 T H 0.0000
87 L H 0.0000
88 Y H -0.4461
89 L H 0.0000
90 Q H -1.0993
91 M H 0.0000
92 N H -1.3560
93 S H -1.2021
94 L H 0.0000
95 R H -2.0792
96 A H -1.6002
97 E H -2.1754
98 D H 0.0000
99 T H -0.6861
100 A H 0.0000
101 V H -0.1882
102 Y H 0.0000
103 Y H -0.3395
104 C H 0.0000
105 A H 0.0000
106 A H 0.0000
107 D H 0.0000
108 V H -0.5551
109 R H -1.1067
110 P H -1.4142
111 D H -2.2180
111A G H -1.4282
112A T H -1.1209
112 T H -0.5928
113 C H -0.5901
114 H H -1.0629
115 Y H -0.8300
116 N H -1.4468
117 S H -0.7362
118 G H -0.7828
119 G H -0.4808
120 Q H -1.0094
121 G H -0.5256
122 T H -0.5134
123 Q H -0.4750
124 V H 0.0000
125 T H -0.1095
126 V H 0.0000
127 S H -0.6224
128 S H -0.4888
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Laboratory of Theory of Biopolymers 2018