Project name: query_structure

Status: done

Started: 2026-03-16 23:24:36
Settings
Chain sequence(s) A: GIPCGESCVYIPCLTSAIGCSCKSKVCYRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:19)
Show buried residues

Minimal score value
-1.768
Maximal score value
2.2308
Average score
0.2541
Total score value
7.624

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.5388
2 I A 1.0348
3 P A 0.1302
4 C A 0.4536
5 G A -0.1400
6 E A 0.1024
7 S A 0.4746
8 C A 1.0331
9 V A 2.0049
10 Y A 2.2308
11 I A 1.7874
12 P A 1.0641
13 C A 0.0000
14 L A 1.7035
15 T A 1.1169
16 S A 0.7751
17 A A 1.2008
18 I A 1.9039
19 G A 0.2771
20 C A 0.0000
21 S A -0.6858
22 C A -0.4211
23 K A -1.7680
24 S A -1.1911
25 K A -1.0014
26 V A -0.5348
27 C A 0.0000
28 Y A -0.7011
29 R A -1.0876
30 N A -1.5995
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Laboratory of Theory of Biopolymers 2018