| Chain sequence(s) |
A: APTTTTKVDIAAFDPDKDGTIELKEALAAGSAAFDKLDPDKDGTLEAKELKGRVSEADLKKLDPDNDGTLEKKEYLAAVEAQFKAANPDNDGTIEARELASPAGSALVNLIR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.0977 | |
| 2 | P | A | -0.2973 | |
| 3 | T | A | -0.2458 | |
| 4 | T | A | -0.5124 | |
| 5 | T | A | -0.7017 | |
| 6 | T | A | -1.1071 | |
| 7 | K | A | -2.2608 | |
| 8 | V | A | -1.4943 | |
| 9 | D | A | -1.9151 | |
| 10 | I | A | -1.3631 | |
| 11 | A | A | -1.2748 | |
| 12 | A | A | -0.7423 | |
| 13 | F | A | -0.8215 | |
| 14 | D | A | 0.0000 | |
| 15 | P | A | -1.8916 | |
| 16 | D | A | -3.2972 | |
| 17 | K | A | -3.5541 | |
| 18 | D | A | -3.5117 | |
| 19 | G | A | -2.3189 | |
| 20 | T | A | -1.7777 | |
| 21 | I | A | 0.0000 | |
| 22 | E | A | -1.3647 | |
| 23 | L | A | -0.9429 | |
| 24 | K | A | -1.5883 | |
| 25 | E | A | 0.0000 | |
| 26 | A | A | 0.0000 | |
| 27 | L | A | -0.1616 | |
| 28 | A | A | -0.1318 | |
| 29 | A | A | -0.4733 | |
| 30 | G | A | 0.0000 | |
| 31 | S | A | -0.6323 | |
| 32 | A | A | -0.9255 | |
| 33 | A | A | 0.0000 | |
| 34 | F | A | 0.0000 | |
| 35 | D | A | -2.7016 | |
| 36 | K | A | -2.8171 | |
| 37 | L | A | -2.0761 | |
| 38 | D | A | 0.0000 | |
| 39 | P | A | -2.6160 | |
| 40 | D | A | -3.6293 | |
| 41 | K | A | -4.0206 | |
| 42 | D | A | -3.5763 | |
| 43 | G | A | -2.8238 | |
| 44 | T | A | -2.4894 | |
| 45 | L | A | 0.0000 | |
| 46 | E | A | -1.9467 | |
| 47 | A | A | -2.3590 | |
| 48 | K | A | -2.8444 | |
| 49 | E | A | -2.0930 | |
| 50 | L | A | 0.0000 | |
| 51 | K | A | -3.0249 | |
| 52 | G | A | -1.9872 | |
| 53 | R | A | -1.7411 | |
| 54 | V | A | -1.5522 | |
| 55 | S | A | -2.1702 | |
| 56 | E | A | -3.2222 | |
| 57 | A | A | -2.1463 | |
| 58 | D | A | -2.5635 | |
| 59 | L | A | -2.8102 | |
| 60 | K | A | -3.9293 | |
| 61 | K | A | -3.3873 | |
| 62 | L | A | -2.1650 | |
| 63 | D | A | 0.0000 | |
| 64 | P | A | -2.5478 | |
| 65 | D | A | -3.5436 | |
| 66 | N | A | -3.8067 | |
| 67 | D | A | -3.6127 | |
| 68 | G | A | -2.6210 | |
| 69 | T | A | -2.3394 | |
| 70 | L | A | 0.0000 | |
| 71 | E | A | -2.6861 | |
| 72 | K | A | -2.2662 | |
| 73 | K | A | -2.4240 | |
| 74 | E | A | -1.7986 | |
| 75 | Y | A | 0.0000 | |
| 76 | L | A | -0.7246 | |
| 77 | A | A | -0.6980 | |
| 78 | A | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | E | A | -1.0573 | |
| 81 | A | A | -0.8225 | |
| 82 | Q | A | -0.8728 | |
| 83 | F | A | 0.0000 | |
| 84 | K | A | -2.5926 | |
| 85 | A | A | -1.4090 | |
| 86 | A | A | 0.0000 | |
| 87 | N | A | 0.0000 | |
| 88 | P | A | -2.2093 | |
| 89 | D | A | -3.3732 | |
| 90 | N | A | -3.5555 | |
| 91 | D | A | -3.3939 | |
| 92 | G | A | -2.4939 | |
| 93 | T | A | -2.0392 | |
| 94 | I | A | 0.0000 | |
| 95 | E | A | -2.0965 | |
| 96 | A | A | -1.9226 | |
| 97 | R | A | -2.3961 | |
| 98 | E | A | -1.7717 | |
| 99 | L | A | 0.0000 | |
| 100 | A | A | -1.3970 | |
| 101 | S | A | -0.6283 | |
| 102 | P | A | -0.3306 | |
| 103 | A | A | -0.5018 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.4577 | |
| 106 | A | A | -0.2931 | |
| 107 | L | A | 0.0000 | |
| 108 | V | A | 0.0000 | |
| 109 | N | A | -1.0740 | |
| 110 | L | A | 0.0000 | |
| 111 | I | A | 0.0000 | |
| 112 | R | A | -2.1090 |