| Chain sequence(s) |
A: SFYINVVSYLCAMVIFTLTAYYQPLEGTPPYPYRTTVDYLRLAGEVITLFTGVLFFFTNIKDLFMKKCPGVNSLFIDGSFQLLYFIYSVLVIVSAALYLAGIEAYLAVMVFALVLGWMNALYFTRGLKLTGTYSIMIQKILFKDLFRFLLVYLLFMIGYASALVSLLNPCANMKVCNEDQTNCTVPTYPSCRDSETFSTFLLDLFKLTIGMGDLEMLSSTKYPVVFIILLVTYIILTFVLLLNMLIALMGETV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:57)
[INFO] Main: Simulation completed successfully. (00:05:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 1.0332 | |
| 2 | F | A | 1.9092 | |
| 3 | Y | A | 2.7022 | |
| 4 | I | A | 2.7384 | |
| 5 | N | A | 1.0110 | |
| 6 | V | A | 1.8633 | |
| 7 | V | A | 2.3330 | |
| 8 | S | A | 1.3422 | |
| 9 | Y | A | 0.0000 | |
| 10 | L | A | 1.6830 | |
| 11 | C | A | 1.5171 | |
| 12 | A | A | 1.3384 | |
| 13 | M | A | 0.0000 | |
| 14 | V | A | 1.9039 | |
| 15 | I | A | 1.8379 | |
| 16 | F | A | 0.0000 | |
| 17 | T | A | 1.8965 | |
| 18 | L | A | 1.9775 | |
| 19 | T | A | 0.0000 | |
| 20 | A | A | 1.6393 | |
| 21 | Y | A | 2.2282 | |
| 22 | Y | A | 2.4524 | |
| 23 | Q | A | 1.2592 | |
| 24 | P | A | 0.6217 | |
| 25 | L | A | 0.5417 | |
| 26 | E | A | -1.4117 | |
| 27 | G | A | -1.1008 | |
| 28 | T | A | -0.3919 | |
| 29 | P | A | 0.0000 | |
| 30 | P | A | 0.6211 | |
| 31 | Y | A | 0.3493 | |
| 32 | P | A | -0.2644 | |
| 33 | Y | A | 0.2661 | |
| 34 | R | A | -1.2187 | |
| 35 | T | A | 0.0477 | |
| 36 | T | A | 1.0757 | |
| 37 | V | A | 2.5724 | |
| 38 | D | A | 1.7896 | |
| 39 | Y | A | 2.5280 | |
| 40 | L | A | 3.1477 | |
| 41 | R | A | 0.0000 | |
| 42 | L | A | 2.4851 | |
| 43 | A | A | 2.1153 | |
| 44 | G | A | 0.0000 | |
| 45 | E | A | 1.8754 | |
| 46 | V | A | 3.1347 | |
| 47 | I | A | 2.7362 | |
| 48 | T | A | 0.0000 | |
| 49 | L | A | 2.8466 | |
| 50 | F | A | 3.5491 | |
| 51 | T | A | 2.4687 | |
| 52 | G | A | 0.0000 | |
| 53 | V | A | 2.7840 | |
| 54 | L | A | 2.7059 | |
| 55 | F | A | 2.1370 | |
| 56 | F | A | 2.4566 | |
| 57 | F | A | 2.3201 | |
| 58 | T | A | 1.1385 | |
| 59 | N | A | 0.0000 | |
| 60 | I | A | 1.2567 | |
| 61 | K | A | -0.3782 | |
| 62 | D | A | -0.3971 | |
| 63 | L | A | 0.4037 | |
| 64 | F | A | 1.0829 | |
| 65 | M | A | 0.3406 | |
| 66 | K | A | -1.2948 | |
| 67 | K | A | -1.2982 | |
| 68 | C | A | 0.2679 | |
| 69 | P | A | -0.2350 | |
| 70 | G | A | 0.0650 | |
| 71 | V | A | 1.2765 | |
| 72 | N | A | -0.2138 | |
| 73 | S | A | -0.3393 | |
| 74 | L | A | 0.9056 | |
| 75 | F | A | 0.8510 | |
| 76 | I | A | 0.5817 | |
| 77 | D | A | -1.0337 | |
| 78 | G | A | -0.2662 | |
| 79 | S | A | 0.6523 | |
| 80 | F | A | 0.8846 | |
| 81 | Q | A | 0.9009 | |
| 82 | L | A | 1.6030 | |
| 83 | L | A | 1.4367 | |
| 84 | Y | A | 0.0000 | |
| 85 | F | A | 2.0469 | |
| 86 | I | A | 1.6013 | |
| 87 | Y | A | 0.0000 | |
| 88 | S | A | 0.0000 | |
| 89 | V | A | 1.6767 | |
| 90 | L | A | 1.7915 | |
| 91 | V | A | 0.0000 | |
| 92 | I | A | 1.9555 | |
| 93 | V | A | 1.6584 | |
| 94 | S | A | 0.0000 | |
| 95 | A | A | 1.3860 | |
| 96 | A | A | 1.2385 | |
| 97 | L | A | 1.0321 | |
| 98 | Y | A | 1.1165 | |
| 99 | L | A | 1.8155 | |
| 100 | A | A | 0.7252 | |
| 101 | G | A | 0.0004 | |
| 102 | I | A | 0.0504 | |
| 103 | E | A | -1.5171 | |
| 104 | A | A | -0.4955 | |
| 105 | Y | A | 0.0000 | |
| 106 | L | A | 0.9939 | |
| 107 | A | A | 0.9886 | |
| 108 | V | A | 1.7927 | |
| 109 | M | A | 0.0000 | |
| 110 | V | A | 2.7546 | |
| 111 | F | A | 3.2705 | |
| 112 | A | A | 0.0000 | |
| 113 | L | A | 2.4297 | |
| 114 | V | A | 3.1148 | |
| 115 | L | A | 2.2327 | |
| 116 | G | A | 0.0000 | |
| 117 | W | A | 1.6713 | |
| 118 | M | A | 1.5513 | |
| 119 | N | A | 0.0000 | |
| 120 | A | A | 0.9751 | |
| 121 | L | A | 1.2793 | |
| 122 | Y | A | 1.2301 | |
| 123 | F | A | 0.7072 | |
| 124 | T | A | 0.5901 | |
| 125 | R | A | 0.0438 | |
| 126 | G | A | -0.0443 | |
| 127 | L | A | 0.2504 | |
| 128 | K | A | -0.8991 | |
| 129 | L | A | 0.9146 | |
| 130 | T | A | 0.8123 | |
| 131 | G | A | 0.5147 | |
| 132 | T | A | 1.1956 | |
| 133 | Y | A | 2.1551 | |
| 134 | S | A | 0.0000 | |
| 135 | I | A | 1.8695 | |
| 136 | M | A | 1.6709 | |
| 137 | I | A | 1.4277 | |
| 138 | Q | A | 0.6807 | |
| 139 | K | A | 0.3884 | |
| 140 | I | A | 1.3291 | |
| 141 | L | A | 1.2626 | |
| 142 | F | A | 1.2989 | |
| 143 | K | A | 0.0235 | |
| 144 | D | A | 0.0000 | |
| 145 | L | A | 1.6536 | |
| 146 | F | A | 2.1367 | |
| 147 | R | A | 0.2107 | |
| 148 | F | A | 1.6821 | |
| 149 | L | A | 2.5876 | |
| 150 | L | A | 2.7793 | |
| 151 | V | A | 3.2090 | |
| 152 | Y | A | 2.9176 | |
| 153 | L | A | 3.3105 | |
| 154 | L | A | 3.6411 | |
| 155 | F | A | 2.6448 | |
| 156 | M | A | 0.0000 | |
| 157 | I | A | 2.8348 | |
| 158 | G | A | 1.2826 | |
| 159 | Y | A | 0.0000 | |
| 160 | A | A | 0.0000 | |
| 161 | S | A | 0.5311 | |
| 162 | A | A | 0.2629 | |
| 163 | L | A | 0.0000 | |
| 164 | V | A | -0.2140 | |
| 165 | S | A | -0.3755 | |
| 166 | L | A | -0.0010 | |
| 167 | L | A | 0.0000 | |
| 168 | N | A | -0.9758 | |
| 169 | P | A | -0.8122 | |
| 170 | C | A | 0.0000 | |
| 171 | A | A | -0.5575 | |
| 172 | N | A | -1.3515 | |
| 173 | M | A | -0.6269 | |
| 174 | K | A | -0.6700 | |
| 175 | V | A | 0.3691 | |
| 176 | C | A | -0.8781 | |
| 177 | N | A | -2.9132 | |
| 178 | E | A | -3.5511 | |
| 179 | D | A | -3.5955 | |
| 180 | Q | A | -3.1769 | |
| 181 | T | A | -1.9231 | |
| 182 | N | A | -1.9564 | |
| 183 | C | A | -0.4428 | |
| 184 | T | A | 0.5105 | |
| 185 | V | A | 1.5747 | |
| 186 | P | A | 0.8755 | |
| 187 | T | A | 0.6961 | |
| 188 | Y | A | 0.6437 | |
| 189 | P | A | -0.2488 | |
| 190 | S | A | -0.0645 | |
| 191 | C | A | -0.6653 | |
| 192 | R | A | -1.8646 | |
| 193 | D | A | -2.4474 | |
| 194 | S | A | -1.6263 | |
| 195 | E | A | -1.7612 | |
| 196 | T | A | 0.0000 | |
| 197 | F | A | -0.2504 | |
| 198 | S | A | -0.1551 | |
| 199 | T | A | 0.1247 | |
| 200 | F | A | 0.0000 | |
| 201 | L | A | 1.1792 | |
| 202 | L | A | 1.4820 | |
| 203 | D | A | -0.1480 | |
| 204 | L | A | 0.0000 | |
| 205 | F | A | 1.3526 | |
| 206 | K | A | 0.2006 | |
| 207 | L | A | 0.6170 | |
| 208 | T | A | 1.1375 | |
| 209 | I | A | 2.0376 | |
| 210 | G | A | 0.7559 | |
| 211 | M | A | 0.7531 | |
| 212 | G | A | -0.7227 | |
| 213 | D | A | -2.1476 | |
| 214 | L | A | -1.0315 | |
| 215 | E | A | -2.1416 | |
| 216 | M | A | -0.9793 | |
| 217 | L | A | 0.0545 | |
| 218 | S | A | -0.6363 | |
| 219 | S | A | -0.4386 | |
| 220 | T | A | 0.0000 | |
| 221 | K | A | -0.7899 | |
| 222 | Y | A | 1.3425 | |
| 223 | P | A | 1.7589 | |
| 224 | V | A | 3.1800 | |
| 225 | V | A | 2.9819 | |
| 226 | F | A | 0.0000 | |
| 227 | I | A | 3.6586 | |
| 228 | I | A | 3.8043 | |
| 229 | L | A | 2.9753 | |
| 230 | L | A | 0.0000 | |
| 231 | V | A | 3.5089 | |
| 232 | T | A | 2.5954 | |
| 233 | Y | A | 0.0000 | |
| 234 | I | A | 2.8703 | |
| 235 | I | A | 4.0114 | |
| 236 | L | A | 3.1367 | |
| 237 | T | A | 0.0000 | |
| 238 | F | A | 3.0659 | |
| 239 | V | A | 3.6755 | |
| 240 | L | A | 3.2257 | |
| 241 | L | A | 0.0000 | |
| 242 | L | A | 2.2481 | |
| 243 | N | A | 1.4688 | |
| 244 | M | A | 2.3356 | |
| 245 | L | A | 1.9044 | |
| 246 | I | A | 2.1694 | |
| 247 | A | A | 1.2399 | |
| 248 | L | A | 1.4460 | |
| 249 | M | A | 1.1032 | |
| 250 | G | A | 0.3983 | |
| 251 | E | A | -0.6865 | |
| 252 | T | A | 0.2418 | |
| 253 | V | A | 1.3707 |