| Chain sequence(s) |
A: CSCSNQVCYRNGVPCAESCVYIPCISTVLG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:03)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:03)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:29)
[INFO] Main: Simulation completed successfully. (00:00:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.1874 | |
| 2 | S | A | -0.1993 | |
| 3 | C | A | 0.1005 | |
| 4 | S | A | -0.6225 | |
| 5 | N | A | -1.6329 | |
| 6 | Q | A | -1.2192 | |
| 7 | V | A | 0.1141 | |
| 8 | C | A | 0.0000 | |
| 9 | Y | A | -0.2581 | |
| 10 | R | A | -1.5912 | |
| 11 | N | A | -1.6958 | |
| 12 | G | A | -0.6571 | |
| 13 | V | A | 0.7421 | |
| 14 | P | A | 0.3155 | |
| 15 | C | A | 0.0000 | |
| 16 | A | A | 0.2941 | |
| 17 | E | A | -0.8301 | |
| 18 | S | A | 0.5164 | |
| 19 | C | A | 1.5036 | |
| 20 | V | A | 2.3409 | |
| 21 | Y | A | 2.3662 | |
| 22 | I | A | 2.3480 | |
| 23 | P | A | 1.8407 | |
| 24 | C | A | 0.0000 | |
| 25 | I | A | 2.8151 | |
| 26 | S | A | 2.1756 | |
| 27 | T | A | 1.9809 | |
| 28 | V | A | 2.9897 | |
| 29 | L | A | 2.6512 | |
| 30 | G | A | 0.9958 |