| Chain sequence(s) |
L: KAALMVVNYWTDLKED
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:28)
[INFO] Main: Simulation completed successfully. (00:00:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 12 | K | L | -1.6729 | |
| 13 | A | L | -0.2389 | |
| 14 | A | L | 0.1844 | |
| 15 | L | L | 0.1382 | |
| 16 | M | L | 1.0492 | |
| 17 | V | L | 1.1178 | |
| 18 | V | L | 0.6977 | |
| 19 | N | L | -0.0908 | |
| 20 | Y | L | 1.4442 | |
| 21 | W | L | 1.4144 | |
| 22 | T | L | -0.2003 | |
| 23 | D | L | -1.5782 | |
| 24 | L | L | 0.5721 | |
| 25 | K | L | -1.8158 | |
| 26 | E | L | -2.4611 | |
| 27 | D | L | -2.1225 |