| Chain sequence(s) |
A: DNGNLWTFIGKAIGSTARSWAEGAMFAPAIGPAKEIVDKLNGN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:24)
[INFO] Main: Simulation completed successfully. (00:00:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.7108 | |
| 2 | N | A | -2.2354 | |
| 3 | G | A | -1.0225 | |
| 4 | N | A | -0.8655 | |
| 5 | L | A | 0.9264 | |
| 6 | W | A | 1.4796 | |
| 7 | T | A | 0.7688 | |
| 8 | F | A | 2.1473 | |
| 9 | I | A | 1.8524 | |
| 10 | G | A | 0.7366 | |
| 11 | K | A | -0.2076 | |
| 12 | A | A | 0.8073 | |
| 13 | I | A | 1.4366 | |
| 14 | G | A | -0.0530 | |
| 15 | S | A | -0.4406 | |
| 16 | T | A | 0.2565 | |
| 17 | A | A | -0.4586 | |
| 18 | R | A | -1.7785 | |
| 19 | S | A | -0.4224 | |
| 20 | W | A | 0.2309 | |
| 21 | A | A | -1.1023 | |
| 22 | E | A | -1.9917 | |
| 23 | G | A | -0.6677 | |
| 24 | A | A | 0.4686 | |
| 25 | M | A | 1.8687 | |
| 26 | F | A | 2.5952 | |
| 27 | A | A | 1.7577 | |
| 28 | P | A | 1.5322 | |
| 29 | A | A | 0.7946 | |
| 30 | I | A | 1.1175 | |
| 31 | G | A | -0.2730 | |
| 32 | P | A | -0.5135 | |
| 33 | A | A | -0.3266 | |
| 34 | K | A | -1.6793 | |
| 35 | E | A | -2.1991 | |
| 36 | I | A | 0.1626 | |
| 37 | V | A | -0.1169 | |
| 38 | D | A | -2.6575 | |
| 39 | K | A | -2.3339 | |
| 40 | L | A | -0.4581 | |
| 41 | N | A | -1.8207 | |
| 42 | G | A | -1.8993 | |
| 43 | N | A | -1.9228 |