Project name: E682V

Status: done

Started: 2025-07-24 08:58:06
Settings
Chain sequence(s) A: DAEFRHDSGYVVHHQKLVFFAEDVGSNKGAIIGLMVGGVVI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:36)
Show buried residues

Minimal score value
-2.395
Maximal score value
2.6871
Average score
0.2829
Total score value
11.5993

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.0467
2 A A -1.2707
3 E A -1.7018
4 F A -0.2993
5 R A -1.5462
6 H A -1.4801
7 D A -0.9331
8 S A 0.1156
9 G A 1.2164
10 Y A 2.2318
11 V A 2.5959
12 V A 1.5664
13 H A -0.1726
14 H A -1.3654
15 Q A -1.4373
16 K A -0.6198
17 L A 1.9563
18 V A 2.2729
19 F A 2.6654
20 F A 1.6710
21 A A -0.7285
22 E A -2.3950
23 D A -2.1305
24 V A -0.1008
25 G A -1.0722
26 S A -1.5455
27 N A -1.8110
28 K A -1.5499
29 G A 0.6903
30 A A 1.5805
31 I A 2.3313
32 I A 0.9567
33 G A -0.0408
34 L A 0.6012
35 M A 1.5781
36 V A 1.8129
37 G A 1.5404
38 G A 1.2506
39 V A 2.6871
40 V A 2.6008
41 I A 1.9249
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Laboratory of Theory of Biopolymers 2018