| Chain sequence(s) |
A: QVQLVESGGGLVQAGGSLRLSCAASGFPVDYWEMHWYRQAPGKEREWVAAIYSKGEETKYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVKDWSGSELWWYDYWGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:53)
[INFO] Main: Simulation completed successfully. (00:01:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.3985 | |
| 2 | V | A | -0.6366 | |
| 3 | Q | A | -0.6825 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.9038 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.6526 | |
| 8 | G | A | -1.0666 | |
| 9 | G | A | -0.8424 | |
| 10 | G | A | -0.0788 | |
| 11 | L | A | 0.9210 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.2931 | |
| 14 | A | A | -1.4623 | |
| 15 | G | A | -1.4016 | |
| 16 | G | A | -0.9934 | |
| 17 | S | A | -1.4363 | |
| 18 | L | A | -1.1210 | |
| 19 | R | A | -2.3538 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.5251 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1427 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.6271 | |
| 26 | G | A | -1.0100 | |
| 27 | F | A | 0.0000 | |
| 28 | P | A | -0.4906 | |
| 29 | V | A | 0.0000 | |
| 30 | D | A | -0.7103 | |
| 31 | Y | A | 0.3506 | |
| 32 | W | A | -0.0000 | |
| 33 | E | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | H | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.7916 | |
| 38 | R | A | -1.6266 | |
| 39 | Q | A | -2.3603 | |
| 40 | A | A | -2.1806 | |
| 41 | P | A | -1.4200 | |
| 42 | G | A | -1.9393 | |
| 43 | K | A | -3.4891 | |
| 44 | E | A | -3.7372 | |
| 45 | R | A | -3.0561 | |
| 46 | E | A | -2.8796 | |
| 47 | W | A | -1.1849 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | Y | A | -1.2771 | |
| 53 | S | A | -1.2199 | |
| 54 | K | A | -2.3452 | |
| 55 | G | A | -2.4348 | |
| 56 | E | A | -3.1809 | |
| 57 | E | A | -2.9281 | |
| 58 | T | A | -1.6069 | |
| 59 | K | A | -1.6033 | |
| 60 | Y | A | -1.3287 | |
| 61 | A | A | -1.7251 | |
| 62 | D | A | -2.5678 | |
| 63 | S | A | -1.8153 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.7816 | |
| 66 | G | A | -1.8743 | |
| 67 | R | A | -1.7380 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -1.2041 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.6423 | |
| 72 | R | A | -1.2463 | |
| 73 | D | A | -1.8715 | |
| 74 | N | A | -1.9186 | |
| 75 | A | A | -1.5882 | |
| 76 | K | A | -2.3441 | |
| 77 | N | A | -1.8314 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | 0.0000 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.6975 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.9557 | |
| 85 | S | A | -1.3766 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.3230 | |
| 88 | P | A | -1.9107 | |
| 89 | E | A | -2.3336 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.9886 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.5835 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.3263 | |
| 96 | C | A | 0.0000 | |
| 97 | N | A | 0.0000 | |
| 98 | V | A | 0.0000 | |
| 99 | K | A | -0.5578 | |
| 100 | D | A | -0.4906 | |
| 101 | W | A | 0.3468 | |
| 102 | S | A | -0.2013 | |
| 103 | G | A | -0.7512 | |
| 104 | S | A | -0.7437 | |
| 105 | E | A | -0.8752 | |
| 106 | L | A | 1.4057 | |
| 107 | W | A | 1.8929 | |
| 108 | W | A | 1.6339 | |
| 109 | Y | A | 1.1627 | |
| 110 | D | A | -0.1996 | |
| 111 | Y | A | 0.0833 | |
| 112 | W | A | 0.1379 | |
| 113 | G | A | -0.1588 | |
| 114 | Q | A | -0.9285 | |
| 115 | G | A | 0.0000 | |
| 116 | T | A | 0.0000 | |
| 117 | Q | A | -1.1725 | |
| 118 | V | A | 0.0000 | |
| 119 | T | A | -0.3429 | |
| 120 | V | A | 0.0000 | |
| 121 | S | A | -0.7917 |