| Chain sequence(s) |
A: LSCGQVNSALAPCITFLTKGGVPSGPCCSGVRGLLGAAKTTADRQAACNCLKAAAGSLHGLNQGNAAALPGRCGVSIPYKISTSTNCATIKF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52)
[INFO] Main: Simulation completed successfully. (00:00:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.4733 | |
| 2 | S | A | 0.0173 | |
| 3 | C | A | 0.3796 | |
| 4 | G | A | -0.5942 | |
| 5 | Q | A | -1.2825 | |
| 6 | V | A | 0.0000 | |
| 7 | N | A | -1.0399 | |
| 8 | S | A | -0.3908 | |
| 9 | A | A | -0.0012 | |
| 10 | L | A | 0.2039 | |
| 11 | A | A | 0.0767 | |
| 12 | P | A | -0.0816 | |
| 13 | C | A | 0.0000 | |
| 14 | I | A | 0.8617 | |
| 15 | T | A | 0.0861 | |
| 16 | F | A | 0.0000 | |
| 17 | L | A | 0.0000 | |
| 18 | T | A | -0.2938 | |
| 19 | K | A | -1.7181 | |
| 20 | G | A | -0.4799 | |
| 21 | G | A | -0.1637 | |
| 22 | V | A | 1.6888 | |
| 23 | P | A | 0.0000 | |
| 24 | S | A | -0.1977 | |
| 25 | G | A | -0.5320 | |
| 26 | P | A | -0.3586 | |
| 27 | C | A | 0.0000 | |
| 28 | C | A | 0.0000 | |
| 29 | S | A | -0.2439 | |
| 30 | G | A | -0.0906 | |
| 31 | V | A | 0.0000 | |
| 32 | R | A | -1.8078 | |
| 33 | G | A | -0.7510 | |
| 34 | L | A | 0.1715 | |
| 35 | L | A | 0.5197 | |
| 36 | G | A | -0.3045 | |
| 37 | A | A | -0.0324 | |
| 38 | A | A | 0.0000 | |
| 39 | K | A | -1.7085 | |
| 40 | T | A | -0.3579 | |
| 41 | T | A | 0.0177 | |
| 42 | A | A | 0.0009 | |
| 43 | D | A | -0.3445 | |
| 44 | R | A | -0.4293 | |
| 45 | Q | A | -0.3429 | |
| 46 | A | A | -0.0337 | |
| 47 | A | A | 0.0000 | |
| 48 | C | A | 0.0000 | |
| 49 | N | A | -1.2730 | |
| 50 | C | A | 0.0000 | |
| 51 | L | A | 0.1398 | |
| 52 | K | A | -0.5852 | |
| 53 | A | A | -0.0550 | |
| 54 | A | A | 0.0298 | |
| 55 | A | A | -0.0695 | |
| 56 | G | A | -0.5024 | |
| 57 | S | A | -0.2411 | |
| 58 | L | A | 0.0883 | |
| 59 | H | A | -1.0181 | |
| 60 | G | A | -0.6109 | |
| 61 | L | A | -0.0499 | |
| 62 | N | A | -1.0372 | |
| 63 | Q | A | -1.4362 | |
| 64 | G | A | -0.7131 | |
| 65 | N | A | -0.2509 | |
| 66 | A | A | -0.1381 | |
| 67 | A | A | 0.0583 | |
| 68 | A | A | 0.0347 | |
| 69 | L | A | 0.0000 | |
| 70 | P | A | 0.0000 | |
| 71 | G | A | -0.7969 | |
| 72 | R | A | -1.9277 | |
| 73 | C | A | 0.0000 | |
| 74 | G | A | -0.4214 | |
| 75 | V | A | 0.1256 | |
| 76 | S | A | -0.1110 | |
| 77 | I | A | 0.2239 | |
| 78 | P | A | -0.1483 | |
| 79 | Y | A | -0.0651 | |
| 80 | K | A | -1.5726 | |
| 81 | I | A | 0.0887 | |
| 82 | S | A | 0.0011 | |
| 83 | T | A | -0.1069 | |
| 84 | S | A | -0.2243 | |
| 85 | T | A | -0.2755 | |
| 86 | N | A | -1.2742 | |
| 87 | C | A | 0.0000 | |
| 88 | A | A | 0.0459 | |
| 89 | T | A | -0.0605 | |
| 90 | I | A | 0.0000 | |
| 91 | K | A | -1.3490 | |
| 92 | F | A | 1.6283 |