| Chain sequence(s) |
A: MSKIKGNVKWFNESKGFGFIKVGGGGSGGSTVANIAPVFTGDCKTIPTPEECATFLYKVVNSGGWEKCWVEEVIPWDLGVPTPLVLHLVKNNALPNGKGLVPGCGGGYDVVAMANPERFMVGLDISENALKKARETFSTMPNSSCFSFVKEDVFTWRPEQPFDFIFDYVFFCAIDPKMRPAWGKAYELLKPDGELITLMYPITNHEGGPPFSVSESEYEKVLVPLGFKQLSLEDYSDLAVEPRKGKEKLARWKKMNN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:21)
[INFO] Main: Simulation completed successfully. (00:04:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5895 | |
| 2 | S | A | -0.5952 | |
| 3 | K | A | -1.7450 | |
| 4 | I | A | -1.4263 | |
| 5 | K | A | -2.2258 | |
| 6 | G | A | -1.7290 | |
| 7 | N | A | -1.3907 | |
| 8 | V | A | 0.3725 | |
| 9 | K | A | -0.7467 | |
| 10 | W | A | -0.0045 | |
| 11 | F | A | 0.2176 | |
| 12 | N | A | -0.9934 | |
| 13 | E | A | -2.0757 | |
| 14 | S | A | -1.4112 | |
| 15 | K | A | -1.4886 | |
| 16 | G | A | -1.2858 | |
| 17 | F | A | 0.0000 | |
| 18 | G | A | 0.0000 | |
| 19 | F | A | 0.0000 | |
| 20 | I | A | 0.0000 | |
| 21 | K | A | -1.6332 | |
| 22 | V | A | -1.2137 | |
| 23 | G | A | -1.6738 | |
| 24 | G | A | -1.4330 | |
| 25 | G | A | -1.0835 | |
| 26 | G | A | -1.1633 | |
| 27 | S | A | -0.9477 | |
| 28 | G | A | -1.0077 | |
| 29 | G | A | -0.7239 | |
| 30 | S | A | -0.1618 | |
| 31 | T | A | 0.2348 | |
| 32 | V | A | 1.3307 | |
| 33 | A | A | 0.0732 | |
| 34 | N | A | -0.8807 | |
| 35 | I | A | -0.3493 | |
| 36 | A | A | -0.3499 | |
| 37 | P | A | -0.0307 | |
| 38 | V | A | 0.7391 | |
| 39 | F | A | 0.1197 | |
| 40 | T | A | -0.6227 | |
| 41 | G | A | -1.5617 | |
| 42 | D | A | -2.1764 | |
| 43 | C | A | -1.3388 | |
| 44 | K | A | -1.8012 | |
| 45 | T | A | -1.1750 | |
| 46 | I | A | 0.0000 | |
| 47 | P | A | -0.9685 | |
| 48 | T | A | -1.1705 | |
| 49 | P | A | 0.0000 | |
| 50 | E | A | -1.8696 | |
| 51 | E | A | -1.8114 | |
| 52 | C | A | 0.0000 | |
| 53 | A | A | 0.0000 | |
| 54 | T | A | -0.8906 | |
| 55 | F | A | -0.0685 | |
| 56 | L | A | 0.0000 | |
| 57 | Y | A | -0.3328 | |
| 58 | K | A | -1.5732 | |
| 59 | V | A | -1.0707 | |
| 60 | V | A | -0.7866 | |
| 61 | N | A | -1.7098 | |
| 62 | S | A | -1.2760 | |
| 63 | G | A | -1.0500 | |
| 64 | G | A | -0.7203 | |
| 65 | W | A | 0.0113 | |
| 66 | E | A | -0.9170 | |
| 67 | K | A | -1.0757 | |
| 68 | C | A | 0.0000 | |
| 69 | W | A | 0.0000 | |
| 70 | V | A | -0.1854 | |
| 71 | E | A | -1.8747 | |
| 72 | E | A | -2.0558 | |
| 73 | V | A | -0.5400 | |
| 74 | I | A | -0.2111 | |
| 75 | P | A | -0.2937 | |
| 76 | W | A | 0.1741 | |
| 77 | D | A | 0.0000 | |
| 78 | L | A | 0.0000 | |
| 79 | G | A | -0.6739 | |
| 80 | V | A | -0.4489 | |
| 81 | P | A | 0.0000 | |
| 82 | T | A | 0.0000 | |
| 83 | P | A | -0.0332 | |
| 84 | L | A | 0.0000 | |
| 85 | V | A | 0.0000 | |
| 86 | L | A | -0.4610 | |
| 87 | H | A | -1.0688 | |
| 88 | L | A | 0.0000 | |
| 89 | V | A | 0.0000 | |
| 90 | K | A | -2.3015 | |
| 91 | N | A | -2.5703 | |
| 92 | N | A | -2.4632 | |
| 93 | A | A | -1.4580 | |
| 94 | L | A | 0.0000 | |
| 95 | P | A | -1.2303 | |
| 96 | N | A | -2.0837 | |
| 97 | G | A | -1.3384 | |
| 98 | K | A | -0.8871 | |
| 99 | G | A | 0.0000 | |
| 100 | L | A | 0.0000 | |
| 101 | V | A | 0.0000 | |
| 102 | P | A | 0.0000 | |
| 103 | G | A | -0.0315 | |
| 104 | C | A | 0.2774 | |
| 105 | G | A | 0.0000 | |
| 106 | G | A | 0.0000 | |
| 107 | G | A | 0.0000 | |
| 108 | Y | A | 0.1271 | |
| 109 | D | A | -0.0405 | |
| 110 | V | A | 0.0000 | |
| 111 | V | A | 0.0000 | |
| 112 | A | A | 0.0000 | |
| 113 | M | A | 0.0000 | |
| 114 | A | A | 0.0000 | |
| 115 | N | A | -0.9630 | |
| 116 | P | A | -1.0620 | |
| 117 | E | A | -2.2556 | |
| 118 | R | A | 0.0000 | |
| 119 | F | A | 0.0300 | |
| 120 | M | A | 0.0000 | |
| 121 | V | A | 0.0000 | |
| 122 | G | A | 0.0000 | |
| 123 | L | A | 0.0000 | |
| 124 | D | A | -0.4217 | |
| 125 | I | A | 0.3681 | |
| 126 | S | A | 0.0000 | |
| 127 | E | A | -2.1368 | |
| 128 | N | A | -1.6790 | |
| 129 | A | A | 0.0000 | |
| 130 | L | A | 0.0000 | |
| 131 | K | A | -3.0559 | |
| 132 | K | A | -2.5108 | |
| 133 | A | A | 0.0000 | |
| 134 | R | A | -2.7645 | |
| 135 | E | A | -2.9927 | |
| 136 | T | A | -1.7587 | |
| 137 | F | A | 0.0000 | |
| 138 | S | A | -1.2146 | |
| 139 | T | A | -0.6540 | |
| 140 | M | A | 0.0000 | |
| 141 | P | A | -0.3560 | |
| 142 | N | A | 0.0000 | |
| 143 | S | A | -0.3042 | |
| 144 | S | A | -0.1554 | |
| 145 | C | A | -0.0809 | |
| 146 | F | A | 0.3270 | |
| 147 | S | A | 0.0344 | |
| 148 | F | A | 0.0000 | |
| 149 | V | A | -0.4934 | |
| 150 | K | A | -1.6020 | |
| 151 | E | A | -1.4368 | |
| 152 | D | A | -0.9489 | |
| 153 | V | A | 0.0000 | |
| 154 | F | A | -0.5143 | |
| 155 | T | A | -0.6248 | |
| 156 | W | A | -1.3550 | |
| 157 | R | A | -2.5314 | |
| 158 | P | A | -2.0665 | |
| 159 | E | A | -2.8041 | |
| 160 | Q | A | -2.5298 | |
| 161 | P | A | -1.9482 | |
| 162 | F | A | 0.0000 | |
| 163 | D | A | -1.3541 | |
| 164 | F | A | 0.0000 | |
| 165 | I | A | 0.0000 | |
| 166 | F | A | 0.0000 | |
| 167 | D | A | 0.0000 | |
| 168 | Y | A | 0.2845 | |
| 169 | V | A | 0.4910 | |
| 170 | F | A | 0.3426 | |
| 171 | F | A | 0.0000 | |
| 172 | C | A | 0.0000 | |
| 173 | A | A | 0.1601 | |
| 174 | I | A | 0.0000 | |
| 175 | D | A | -1.0836 | |
| 176 | P | A | -1.1484 | |
| 177 | K | A | -1.8284 | |
| 178 | M | A | -0.7066 | |
| 179 | R | A | 0.0000 | |
| 180 | P | A | -1.0718 | |
| 181 | A | A | -0.7466 | |
| 182 | W | A | 0.0000 | |
| 183 | G | A | 0.0000 | |
| 184 | K | A | -2.1280 | |
| 185 | A | A | 0.0000 | |
| 186 | Y | A | 0.0000 | |
| 187 | E | A | -2.7014 | |
| 188 | L | A | 0.0000 | |
| 189 | L | A | -1.6705 | |
| 190 | K | A | -2.1194 | |
| 191 | P | A | -2.1348 | |
| 192 | D | A | -2.5753 | |
| 193 | G | A | 0.0000 | |
| 194 | E | A | 0.0000 | |
| 195 | L | A | 0.0000 | |
| 196 | I | A | 0.0000 | |
| 197 | T | A | 0.0000 | |
| 198 | L | A | 0.0000 | |
| 199 | M | A | 0.0000 | |
| 200 | Y | A | 0.0000 | |
| 201 | P | A | 0.0000 | |
| 202 | I | A | -0.3615 | |
| 203 | T | A | -0.9248 | |
| 204 | N | A | -1.8020 | |
| 205 | H | A | -2.0137 | |
| 206 | E | A | -2.4678 | |
| 207 | G | A | -1.3907 | |
| 208 | G | A | -0.8351 | |
| 209 | P | A | 0.0000 | |
| 210 | P | A | 0.0000 | |
| 211 | F | A | -0.5124 | |
| 212 | S | A | -0.8281 | |
| 213 | V | A | 0.0000 | |
| 214 | S | A | -0.7496 | |
| 215 | E | A | -1.0899 | |
| 216 | S | A | -1.3985 | |
| 217 | E | A | -1.5998 | |
| 218 | Y | A | 0.0000 | |
| 219 | E | A | -1.8660 | |
| 220 | K | A | -1.9783 | |
| 221 | V | A | -0.9769 | |
| 222 | L | A | 0.0000 | |
| 223 | V | A | 0.1672 | |
| 224 | P | A | -0.0664 | |
| 225 | L | A | -0.4123 | |
| 226 | G | A | -0.5258 | |
| 227 | F | A | 0.0000 | |
| 228 | K | A | -1.4411 | |
| 229 | Q | A | -0.3530 | |
| 230 | L | A | 0.7992 | |
| 231 | S | A | 0.5496 | |
| 232 | L | A | 0.2522 | |
| 233 | E | A | -1.1460 | |
| 234 | D | A | -2.3908 | |
| 235 | Y | A | -1.5869 | |
| 236 | S | A | -2.1464 | |
| 237 | D | A | -2.3689 | |
| 238 | L | A | -1.0875 | |
| 239 | A | A | 0.0000 | |
| 240 | V | A | -1.3921 | |
| 241 | E | A | -2.3848 | |
| 242 | P | A | -1.4945 | |
| 243 | R | A | 0.0000 | |
| 244 | K | A | -2.3605 | |
| 245 | G | A | -1.8124 | |
| 246 | K | A | -1.1489 | |
| 247 | E | A | 0.0000 | |
| 248 | K | A | -1.2360 | |
| 249 | L | A | 0.0000 | |
| 250 | A | A | 0.0000 | |
| 251 | R | A | -0.0845 | |
| 252 | W | A | 0.0000 | |
| 253 | K | A | -1.5959 | |
| 254 | K | A | -2.4051 | |
| 255 | M | A | -1.3736 | |
| 256 | N | A | -2.1900 | |
| 257 | N | A | -1.8414 |