Project name: 7522277c922fda6

Status: done

Started: 2025-02-07 23:21:49
Settings
Chain sequence(s) A: MSKIKGNVKWFNESKGFGFIKVGGGGSGGSTVANIAPVFTGDCKTIPTPEECATFLYKVVNSGGWEKCWVEEVIPWDLGVPTPLVLHLVKNNALPNGKGLVPGCGGGYDVVAMANPERFMVGLDISENALKKARETFSTMPNSSCFSFVKEDVFTWRPEQPFDFIFDYVFFCAIDPKMRPAWGKAYELLKPDGELITLMYPITNHEGGPPFSVSESEYEKVLVPLGFKQLSLEDYSDLAVEPRKGKEKLARWKKMNN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:22)
Show buried residues

Minimal score value
-3.0559
Maximal score value
1.3307
Average score
-0.7395
Total score value
-190.045

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.5895
2 S A -0.5952
3 K A -1.7450
4 I A -1.4263
5 K A -2.2258
6 G A -1.7290
7 N A -1.3907
8 V A 0.3725
9 K A -0.7467
10 W A -0.0045
11 F A 0.2176
12 N A -0.9934
13 E A -2.0757
14 S A -1.4112
15 K A -1.4886
16 G A -1.2858
17 F A 0.0000
18 G A 0.0000
19 F A 0.0000
20 I A 0.0000
21 K A -1.6332
22 V A -1.2137
23 G A -1.6738
24 G A -1.4330
25 G A -1.0835
26 G A -1.1633
27 S A -0.9477
28 G A -1.0077
29 G A -0.7239
30 S A -0.1618
31 T A 0.2348
32 V A 1.3307
33 A A 0.0732
34 N A -0.8807
35 I A -0.3493
36 A A -0.3499
37 P A -0.0307
38 V A 0.7391
39 F A 0.1197
40 T A -0.6227
41 G A -1.5617
42 D A -2.1764
43 C A -1.3388
44 K A -1.8012
45 T A -1.1750
46 I A 0.0000
47 P A -0.9685
48 T A -1.1705
49 P A 0.0000
50 E A -1.8696
51 E A -1.8114
52 C A 0.0000
53 A A 0.0000
54 T A -0.8906
55 F A -0.0685
56 L A 0.0000
57 Y A -0.3328
58 K A -1.5732
59 V A -1.0707
60 V A -0.7866
61 N A -1.7098
62 S A -1.2760
63 G A -1.0500
64 G A -0.7203
65 W A 0.0113
66 E A -0.9170
67 K A -1.0757
68 C A 0.0000
69 W A 0.0000
70 V A -0.1854
71 E A -1.8747
72 E A -2.0558
73 V A -0.5400
74 I A -0.2111
75 P A -0.2937
76 W A 0.1741
77 D A 0.0000
78 L A 0.0000
79 G A -0.6739
80 V A -0.4489
81 P A 0.0000
82 T A 0.0000
83 P A -0.0332
84 L A 0.0000
85 V A 0.0000
86 L A -0.4610
87 H A -1.0688
88 L A 0.0000
89 V A 0.0000
90 K A -2.3015
91 N A -2.5703
92 N A -2.4632
93 A A -1.4580
94 L A 0.0000
95 P A -1.2303
96 N A -2.0837
97 G A -1.3384
98 K A -0.8871
99 G A 0.0000
100 L A 0.0000
101 V A 0.0000
102 P A 0.0000
103 G A -0.0315
104 C A 0.2774
105 G A 0.0000
106 G A 0.0000
107 G A 0.0000
108 Y A 0.1271
109 D A -0.0405
110 V A 0.0000
111 V A 0.0000
112 A A 0.0000
113 M A 0.0000
114 A A 0.0000
115 N A -0.9630
116 P A -1.0620
117 E A -2.2556
118 R A 0.0000
119 F A 0.0300
120 M A 0.0000
121 V A 0.0000
122 G A 0.0000
123 L A 0.0000
124 D A -0.4217
125 I A 0.3681
126 S A 0.0000
127 E A -2.1368
128 N A -1.6790
129 A A 0.0000
130 L A 0.0000
131 K A -3.0559
132 K A -2.5108
133 A A 0.0000
134 R A -2.7645
135 E A -2.9927
136 T A -1.7587
137 F A 0.0000
138 S A -1.2146
139 T A -0.6540
140 M A 0.0000
141 P A -0.3560
142 N A 0.0000
143 S A -0.3042
144 S A -0.1554
145 C A -0.0809
146 F A 0.3270
147 S A 0.0344
148 F A 0.0000
149 V A -0.4934
150 K A -1.6020
151 E A -1.4368
152 D A -0.9489
153 V A 0.0000
154 F A -0.5143
155 T A -0.6248
156 W A -1.3550
157 R A -2.5314
158 P A -2.0665
159 E A -2.8041
160 Q A -2.5298
161 P A -1.9482
162 F A 0.0000
163 D A -1.3541
164 F A 0.0000
165 I A 0.0000
166 F A 0.0000
167 D A 0.0000
168 Y A 0.2845
169 V A 0.4910
170 F A 0.3426
171 F A 0.0000
172 C A 0.0000
173 A A 0.1601
174 I A 0.0000
175 D A -1.0836
176 P A -1.1484
177 K A -1.8284
178 M A -0.7066
179 R A 0.0000
180 P A -1.0718
181 A A -0.7466
182 W A 0.0000
183 G A 0.0000
184 K A -2.1280
185 A A 0.0000
186 Y A 0.0000
187 E A -2.7014
188 L A 0.0000
189 L A -1.6705
190 K A -2.1194
191 P A -2.1348
192 D A -2.5753
193 G A 0.0000
194 E A 0.0000
195 L A 0.0000
196 I A 0.0000
197 T A 0.0000
198 L A 0.0000
199 M A 0.0000
200 Y A 0.0000
201 P A 0.0000
202 I A -0.3615
203 T A -0.9248
204 N A -1.8020
205 H A -2.0137
206 E A -2.4678
207 G A -1.3907
208 G A -0.8351
209 P A 0.0000
210 P A 0.0000
211 F A -0.5124
212 S A -0.8281
213 V A 0.0000
214 S A -0.7496
215 E A -1.0899
216 S A -1.3985
217 E A -1.5998
218 Y A 0.0000
219 E A -1.8660
220 K A -1.9783
221 V A -0.9769
222 L A 0.0000
223 V A 0.1672
224 P A -0.0664
225 L A -0.4123
226 G A -0.5258
227 F A 0.0000
228 K A -1.4411
229 Q A -0.3530
230 L A 0.7992
231 S A 0.5496
232 L A 0.2522
233 E A -1.1460
234 D A -2.3908
235 Y A -1.5869
236 S A -2.1464
237 D A -2.3689
238 L A -1.0875
239 A A 0.0000
240 V A -1.3921
241 E A -2.3848
242 P A -1.4945
243 R A 0.0000
244 K A -2.3605
245 G A -1.8124
246 K A -1.1489
247 E A 0.0000
248 K A -1.2360
249 L A 0.0000
250 A A 0.0000
251 R A -0.0845
252 W A 0.0000
253 K A -1.5959
254 K A -2.4051
255 M A -1.3736
256 N A -2.1900
257 N A -1.8414
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Laboratory of Theory of Biopolymers 2018