Project name: 754edcd8da5a562

Status: done

Started: 2026-06-23 14:31:42
Settings
Chain sequence(s) A: MSHHHHHHSGKVIPNMLPILEQLKEALKEIEEIAKKIKSGELKESEESMAELFYLRSVIRYAVGQIRKRFEAKEFPEEMYTEEVKEQLELLEEYSEKLYKTTTLEEFAKVIIPFSEHIEKILEVIEKLIKAVEEIIKEQENS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:07:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:07:03)
Show buried residues

Minimal score value
-4.6765
Maximal score value
1.0675
Average score
-1.8154
Total score value
-257.7843

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.5475
2 S A -0.6247
3 H A -1.7561
4 H A -2.3640
5 H A -2.7783
6 H A -2.8068
7 H A -2.5196
8 H A -2.6031
9 S A -2.0672
10 G A -1.8310
11 K A -1.7344
12 V A -0.6266
13 I A 0.1031
14 P A -0.4815
15 N A -1.0494
16 M A 0.0000
17 L A -0.9802
18 P A -1.3836
19 I A 0.0000
20 L A 0.0000
21 E A -2.8690
22 Q A -2.2613
23 L A 0.0000
24 K A -2.8609
25 E A -3.2281
26 A A 0.0000
27 L A 0.0000
28 K A -2.9595
29 E A -3.1989
30 I A 0.0000
31 E A -3.1775
32 E A -3.4849
33 I A 0.0000
34 A A 0.0000
35 K A -3.6900
36 K A -3.3801
37 I A -2.8206
38 K A -2.9686
39 S A -2.3787
40 G A -2.5295
41 E A -3.3256
42 L A -2.6565
43 K A -3.4424
44 E A -3.6410
45 S A -2.9145
46 E A -3.4013
47 E A -3.3704
48 S A -2.3291
49 M A -1.6033
50 A A -1.0318
51 E A -1.4583
52 L A 0.0000
53 F A 1.0675
54 Y A 0.9173
55 L A 0.0000
56 R A -0.2316
57 S A 0.2995
58 V A 0.1059
59 I A 0.0000
60 R A -1.1125
61 Y A 0.4738
62 A A 0.0000
63 V A 0.0000
64 G A -1.1275
65 Q A -1.3135
66 I A 0.0000
67 R A -3.3779
68 K A -3.4452
69 R A -2.7058
70 F A -2.6341
71 E A -3.3535
72 A A -2.4741
73 K A -3.2268
74 E A -2.3630
75 F A 0.0000
76 P A -2.1077
77 E A -2.9482
78 E A -2.7211
79 M A -2.2518
80 Y A -2.1235
81 T A -2.4837
82 E A -3.4298
83 E A -3.9350
84 V A 0.0000
85 K A -3.4042
86 E A -3.9289
87 Q A -3.2271
88 L A 0.0000
89 E A -3.4437
90 L A -2.1146
91 L A 0.0000
92 E A -2.9364
93 E A -3.0302
94 Y A 0.0000
95 S A 0.0000
96 E A -3.2566
97 K A -2.7677
98 L A 0.0000
99 Y A -1.2346
100 K A -2.1247
101 T A 0.0000
102 T A -0.5663
103 T A -1.2424
104 L A -1.8438
105 E A -2.7414
106 E A -2.5104
107 F A 0.0000
108 A A -1.6519
109 K A -2.3415
110 V A 0.0000
111 I A 0.0000
112 I A -1.1412
113 P A -0.8880
114 F A 0.0000
115 S A -2.1503
116 E A -2.6489
117 H A -2.2746
118 I A 0.0000
119 E A -3.6914
120 K A -3.8233
121 I A 0.0000
122 L A -2.7836
123 E A -3.4569
124 V A 0.0000
125 I A 0.0000
126 E A -2.9971
127 K A -2.8895
128 L A 0.0000
129 I A -2.4155
130 K A -2.9204
131 A A 0.0000
132 V A 0.0000
133 E A -3.0384
134 E A -3.8560
135 I A -3.0585
136 I A -3.0495
137 K A -4.5410
138 E A -4.6765
139 Q A -4.3230
140 E A -4.2535
141 N A -3.6044
142 S A -2.4964
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018