| Chain sequence(s) |
A: MSHHHHHHSGKVIPNMLPILEQLKEALKEIEEIAKKIKSGELKESEESMAELFYLRSVIRYAVGQIRKRFEAKEFPEEMYTEEVKEQLELLEEYSEKLYKTTTLEEFAKVIIPFSEHIEKILEVIEKLIKAVEEIIKEQENS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:01)
[INFO] Main: Simulation completed successfully. (00:07:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5475 | |
| 2 | S | A | -0.6247 | |
| 3 | H | A | -1.7561 | |
| 4 | H | A | -2.3640 | |
| 5 | H | A | -2.7783 | |
| 6 | H | A | -2.8068 | |
| 7 | H | A | -2.5196 | |
| 8 | H | A | -2.6031 | |
| 9 | S | A | -2.0672 | |
| 10 | G | A | -1.8310 | |
| 11 | K | A | -1.7344 | |
| 12 | V | A | -0.6266 | |
| 13 | I | A | 0.1031 | |
| 14 | P | A | -0.4815 | |
| 15 | N | A | -1.0494 | |
| 16 | M | A | 0.0000 | |
| 17 | L | A | -0.9802 | |
| 18 | P | A | -1.3836 | |
| 19 | I | A | 0.0000 | |
| 20 | L | A | 0.0000 | |
| 21 | E | A | -2.8690 | |
| 22 | Q | A | -2.2613 | |
| 23 | L | A | 0.0000 | |
| 24 | K | A | -2.8609 | |
| 25 | E | A | -3.2281 | |
| 26 | A | A | 0.0000 | |
| 27 | L | A | 0.0000 | |
| 28 | K | A | -2.9595 | |
| 29 | E | A | -3.1989 | |
| 30 | I | A | 0.0000 | |
| 31 | E | A | -3.1775 | |
| 32 | E | A | -3.4849 | |
| 33 | I | A | 0.0000 | |
| 34 | A | A | 0.0000 | |
| 35 | K | A | -3.6900 | |
| 36 | K | A | -3.3801 | |
| 37 | I | A | -2.8206 | |
| 38 | K | A | -2.9686 | |
| 39 | S | A | -2.3787 | |
| 40 | G | A | -2.5295 | |
| 41 | E | A | -3.3256 | |
| 42 | L | A | -2.6565 | |
| 43 | K | A | -3.4424 | |
| 44 | E | A | -3.6410 | |
| 45 | S | A | -2.9145 | |
| 46 | E | A | -3.4013 | |
| 47 | E | A | -3.3704 | |
| 48 | S | A | -2.3291 | |
| 49 | M | A | -1.6033 | |
| 50 | A | A | -1.0318 | |
| 51 | E | A | -1.4583 | |
| 52 | L | A | 0.0000 | |
| 53 | F | A | 1.0675 | |
| 54 | Y | A | 0.9173 | |
| 55 | L | A | 0.0000 | |
| 56 | R | A | -0.2316 | |
| 57 | S | A | 0.2995 | |
| 58 | V | A | 0.1059 | |
| 59 | I | A | 0.0000 | |
| 60 | R | A | -1.1125 | |
| 61 | Y | A | 0.4738 | |
| 62 | A | A | 0.0000 | |
| 63 | V | A | 0.0000 | |
| 64 | G | A | -1.1275 | |
| 65 | Q | A | -1.3135 | |
| 66 | I | A | 0.0000 | |
| 67 | R | A | -3.3779 | |
| 68 | K | A | -3.4452 | |
| 69 | R | A | -2.7058 | |
| 70 | F | A | -2.6341 | |
| 71 | E | A | -3.3535 | |
| 72 | A | A | -2.4741 | |
| 73 | K | A | -3.2268 | |
| 74 | E | A | -2.3630 | |
| 75 | F | A | 0.0000 | |
| 76 | P | A | -2.1077 | |
| 77 | E | A | -2.9482 | |
| 78 | E | A | -2.7211 | |
| 79 | M | A | -2.2518 | |
| 80 | Y | A | -2.1235 | |
| 81 | T | A | -2.4837 | |
| 82 | E | A | -3.4298 | |
| 83 | E | A | -3.9350 | |
| 84 | V | A | 0.0000 | |
| 85 | K | A | -3.4042 | |
| 86 | E | A | -3.9289 | |
| 87 | Q | A | -3.2271 | |
| 88 | L | A | 0.0000 | |
| 89 | E | A | -3.4437 | |
| 90 | L | A | -2.1146 | |
| 91 | L | A | 0.0000 | |
| 92 | E | A | -2.9364 | |
| 93 | E | A | -3.0302 | |
| 94 | Y | A | 0.0000 | |
| 95 | S | A | 0.0000 | |
| 96 | E | A | -3.2566 | |
| 97 | K | A | -2.7677 | |
| 98 | L | A | 0.0000 | |
| 99 | Y | A | -1.2346 | |
| 100 | K | A | -2.1247 | |
| 101 | T | A | 0.0000 | |
| 102 | T | A | -0.5663 | |
| 103 | T | A | -1.2424 | |
| 104 | L | A | -1.8438 | |
| 105 | E | A | -2.7414 | |
| 106 | E | A | -2.5104 | |
| 107 | F | A | 0.0000 | |
| 108 | A | A | -1.6519 | |
| 109 | K | A | -2.3415 | |
| 110 | V | A | 0.0000 | |
| 111 | I | A | 0.0000 | |
| 112 | I | A | -1.1412 | |
| 113 | P | A | -0.8880 | |
| 114 | F | A | 0.0000 | |
| 115 | S | A | -2.1503 | |
| 116 | E | A | -2.6489 | |
| 117 | H | A | -2.2746 | |
| 118 | I | A | 0.0000 | |
| 119 | E | A | -3.6914 | |
| 120 | K | A | -3.8233 | |
| 121 | I | A | 0.0000 | |
| 122 | L | A | -2.7836 | |
| 123 | E | A | -3.4569 | |
| 124 | V | A | 0.0000 | |
| 125 | I | A | 0.0000 | |
| 126 | E | A | -2.9971 | |
| 127 | K | A | -2.8895 | |
| 128 | L | A | 0.0000 | |
| 129 | I | A | -2.4155 | |
| 130 | K | A | -2.9204 | |
| 131 | A | A | 0.0000 | |
| 132 | V | A | 0.0000 | |
| 133 | E | A | -3.0384 | |
| 134 | E | A | -3.8560 | |
| 135 | I | A | -3.0585 | |
| 136 | I | A | -3.0495 | |
| 137 | K | A | -4.5410 | |
| 138 | E | A | -4.6765 | |
| 139 | Q | A | -4.3230 | |
| 140 | E | A | -4.2535 | |
| 141 | N | A | -3.6044 | |
| 142 | S | A | -2.4964 |