Chain sequence(s) |
H: QVQLQESGGGSVPAGGSLRLSCAASGSTYSANCMGWFRQAPGKEREEVASMSIRSGRTYYSDSVKGRFTISQDGSKNTLYLQLNSLKAEDTALYYCAAAYGGSRCVYNYRGQGTQVTVSS
input PDB |
Selected Chain(s) | H |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:44) [INFO] Main: Simulation completed successfully. (00:00:44) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.6216 | |
2 | V | H | 0.0000 | |
3 | Q | H | -1.9039 | |
4 | L | H | -1.5032 | |
5 | Q | H | -1.9230 | |
6 | E | H | -1.3038 | |
7 | S | H | -1.1001 | |
8 | G | H | -1.0957 | |
9 | G | H | -0.9951 | |
11 | G | H | -0.7691 | |
12 | S | H | -0.4794 | |
13 | V | H | -0.4428 | |
14 | P | H | -0.7564 | |
15 | A | H | -1.2124 | |
16 | G | H | -1.1732 | |
17 | G | H | -0.8065 | |
18 | S | H | -0.9769 | |
19 | L | H | -0.8546 | |
20 | R | H | -1.6675 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.8190 | |
23 | C | H | 0.0000 | |
24 | A | H | -1.2075 | |
25 | A | H | -1.0978 | |
26 | S | H | -1.1621 | |
27 | G | H | -1.1128 | |
28 | S | H | -0.6593 | |
29 | T | H | -0.2577 | |
30 | Y | H | 0.9430 | |
35 | S | H | -0.1185 | |
36 | A | H | -0.2881 | |
37 | N | H | -0.3909 | |
38 | C | H | -0.2282 | |
39 | M | H | 0.1122 | |
40 | G | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | F | H | -0.5600 | |
43 | R | H | 0.0000 | |
44 | Q | H | -1.6808 | |
45 | A | H | 0.0000 | |
46 | P | H | -1.3898 | |
47 | G | H | -1.6899 | |
48 | K | H | -2.7156 | |
49 | E | H | -3.2101 | |
50 | R | H | -2.6316 | |
51 | E | H | -1.9254 | |
52 | E | H | -0.9104 | |
53 | V | H | 0.0000 | |
54 | A | H | 0.0000 | |
55 | S | H | 0.0000 | |
56 | M | H | 0.0000 | |
57 | S | H | -1.2007 | |
58 | I | H | -1.1674 | |
59 | R | H | -2.2078 | |
62 | S | H | -1.7343 | |
63 | G | H | -1.7826 | |
64 | R | H | -2.1393 | |
65 | T | H | -0.5304 | |
66 | Y | H | 0.0309 | |
67 | Y | H | -0.4596 | |
68 | S | H | -1.2623 | |
69 | D | H | -2.3636 | |
70 | S | H | -1.9473 | |
71 | V | H | 0.0000 | |
72 | K | H | -2.4645 | |
74 | G | H | -1.7467 | |
75 | R | H | -1.7247 | |
76 | F | H | 0.0000 | |
77 | T | H | -0.6873 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.4673 | |
80 | Q | H | -1.2551 | |
81 | D | H | -1.7344 | |
82 | G | H | -1.7688 | |
83 | S | H | -1.7104 | |
84 | K | H | -2.6067 | |
85 | N | H | -2.2575 | |
86 | T | H | -1.5355 | |
87 | L | H | 0.0000 | |
88 | Y | H | -0.4770 | |
89 | L | H | 0.0000 | |
90 | Q | H | -1.0551 | |
91 | L | H | 0.0000 | |
92 | N | H | -1.3201 | |
93 | S | H | -1.1844 | |
94 | L | H | 0.0000 | |
95 | K | H | -2.5986 | |
96 | A | H | -1.8131 | |
97 | E | H | -2.4273 | |
98 | D | H | 0.0000 | |
99 | T | H | -1.0862 | |
100 | A | H | 0.0000 | |
101 | L | H | -0.2907 | |
102 | Y | H | 0.0000 | |
103 | Y | H | -0.8429 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | A | H | 0.0403 | |
107 | A | H | 0.0000 | |
108 | Y | H | 0.2351 | |
109 | G | H | -0.5478 | |
110 | G | H | -1.0906 | |
111 | S | H | -0.8953 | |
112 | R | H | -1.4377 | |
113 | C | H | -0.0443 | |
114 | V | H | 1.1761 | |
115 | Y | H | 0.2743 | |
116 | N | H | -0.7041 | |
117 | Y | H | -0.9210 | |
118 | R | H | -1.7320 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.7342 | |
121 | G | H | -1.1848 | |
122 | T | H | -0.9628 | |
123 | Q | H | -1.0629 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.7881 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.9122 | |
128 | S | H | -0.6608 |