| Chain sequence(s) |
A: VLGAFSDGLAHLDNLKGTFATLSEL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:03)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:03)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:03)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 2.6914 | |
| 2 | L | A | 2.5628 | |
| 3 | G | A | 1.0672 | |
| 4 | A | A | 1.3117 | |
| 5 | F | A | 2.2664 | |
| 6 | S | A | 0.6978 | |
| 7 | D | A | -0.9621 | |
| 8 | G | A | -0.2087 | |
| 9 | L | A | 0.4294 | |
| 10 | A | A | -0.9558 | |
| 11 | H | A | -1.3968 | |
| 12 | L | A | -0.5800 | |
| 13 | D | A | -2.1869 | |
| 14 | N | A | -1.8390 | |
| 15 | L | A | -0.2957 | |
| 16 | K | A | -1.3711 | |
| 17 | G | A | -0.8580 | |
| 18 | T | A | 0.2802 | |
| 19 | F | A | 1.5245 | |
| 20 | A | A | 0.5773 | |
| 21 | T | A | 0.8097 | |
| 22 | L | A | 1.8322 | |
| 23 | S | A | 0.6134 | |
| 24 | E | A | -0.4141 | |
| 25 | L | A | 1.3219 |