| Chain sequence(s) |
A: EVQLVESGGGVVQPGNSLRLSCAASGFSFSSGMSWVRQAPGKGLEWVSSISGNGKSTLYADSVKGRFTISRDNAKTTLYLQMNSLRPEDTALYYCTIGFGGSPGDPTPRGGYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:10)
[INFO] Main: Simulation completed successfully. (00:01:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.0190 | |
| 2 | V | A | -0.9259 | |
| 3 | Q | A | -1.2902 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.1773 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.4170 | |
| 8 | G | A | -0.7427 | |
| 9 | G | A | 0.0231 | |
| 10 | G | A | 0.8106 | |
| 11 | V | A | 1.5749 | |
| 12 | V | A | -0.0942 | |
| 13 | Q | A | -1.5246 | |
| 14 | P | A | -1.8195 | |
| 15 | G | A | -1.7709 | |
| 16 | N | A | -1.8032 | |
| 17 | S | A | -1.4706 | |
| 18 | L | A | -0.8747 | |
| 19 | R | A | -1.7756 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4323 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.2341 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.9827 | |
| 26 | G | A | -1.1556 | |
| 27 | F | A | -0.3840 | |
| 28 | S | A | -0.2814 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.8121 | |
| 31 | S | A | -0.3473 | |
| 32 | G | A | -0.3975 | |
| 33 | M | A | 0.0000 | |
| 34 | S | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | V | A | 0.0000 | |
| 37 | R | A | 0.0000 | |
| 38 | Q | A | -0.7821 | |
| 39 | A | A | -1.1483 | |
| 40 | P | A | -0.9542 | |
| 41 | G | A | -1.5041 | |
| 42 | K | A | -2.2443 | |
| 43 | G | A | -1.3788 | |
| 44 | L | A | -0.6421 | |
| 45 | E | A | -1.0942 | |
| 46 | W | A | 0.0000 | |
| 47 | V | A | 0.0000 | |
| 48 | S | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | I | A | 0.0000 | |
| 51 | S | A | -0.7850 | |
| 52 | G | A | -1.2564 | |
| 53 | N | A | -2.2778 | |
| 54 | G | A | -2.0814 | |
| 55 | K | A | -2.3348 | |
| 56 | S | A | -1.0795 | |
| 57 | T | A | -0.0647 | |
| 58 | L | A | 0.2887 | |
| 59 | Y | A | -0.6483 | |
| 60 | A | A | 0.0000 | |
| 61 | D | A | -2.4135 | |
| 62 | S | A | -1.7616 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.4266 | |
| 65 | G | A | -1.6385 | |
| 66 | R | A | 0.0000 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -0.6763 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.7302 | |
| 71 | R | A | -1.4594 | |
| 72 | D | A | -1.9297 | |
| 73 | N | A | -2.1102 | |
| 74 | A | A | -1.4461 | |
| 75 | K | A | -2.2413 | |
| 76 | T | A | -1.4534 | |
| 77 | T | A | 0.0000 | |
| 78 | L | A | 0.0000 | |
| 79 | Y | A | -0.5700 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.0639 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.4281 | |
| 84 | S | A | -1.3630 | |
| 85 | L | A | 0.0000 | |
| 86 | R | A | -2.4682 | |
| 87 | P | A | -2.0069 | |
| 88 | E | A | -2.3598 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.5814 | |
| 91 | A | A | 0.0000 | |
| 92 | L | A | 0.4412 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | 0.0000 | |
| 95 | C | A | 0.0000 | |
| 96 | T | A | 0.0000 | |
| 97 | I | A | 0.0000 | |
| 98 | G | A | 0.0000 | |
| 99 | F | A | 0.3285 | |
| 100 | G | A | 0.0000 | |
| 101 | G | A | -0.7484 | |
| 102 | S | A | -0.6804 | |
| 103 | P | A | -1.2523 | |
| 104 | G | A | -1.3642 | |
| 105 | D | A | -1.7569 | |
| 106 | P | A | -1.1892 | |
| 107 | T | A | -0.8270 | |
| 108 | P | A | 0.0000 | |
| 109 | R | A | -2.0661 | |
| 110 | G | A | -1.1480 | |
| 111 | G | A | -0.6820 | |
| 112 | Y | A | 0.4295 | |
| 113 | W | A | 0.3975 | |
| 114 | G | A | -0.1697 | |
| 115 | Q | A | -0.9810 | |
| 116 | G | A | -0.2270 | |
| 117 | T | A | 0.1164 | |
| 118 | L | A | 0.8367 | |
| 119 | V | A | 0.0000 | |
| 120 | T | A | 0.2303 | |
| 121 | V | A | 0.0000 | |
| 122 | S | A | -0.8145 | |
| 123 | S | A | -0.6983 |