Project name: query_structure

Status: done

Started: 2026-03-16 23:28:25
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Chain sequence(s) A: GSARDDSLVGDAGANSLVGLAGNDLLLGGAGDDLLLGDEGSDVLDGDAGNDVLDGGQGDDRYVFGVGYGHDRIVESGGGHDTIRINAGADQLWFARQGNDLEIRILGTDDALTVHDWYRDADHRVEIIHAANQAVDQAGIEKLVEAMAQYPD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:08)
Show buried residues

Minimal score value
-3.2702
Maximal score value
1.6015
Average score
-1.0382
Total score value
-157.8106

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.7245
2 S A -1.0105
3 A A -1.5534
4 R A -3.0846
5 D A -3.2702
6 D A -1.6252
7 S A -0.2178
8 L A 1.0357
9 V A 1.6015
10 G A -0.0813
11 D A -1.4961
12 A A -1.2732
13 G A -1.3551
14 A A -1.3080
15 N A -0.6254
16 S A -0.0105
17 L A 0.9647
18 V A 0.7060
19 G A 0.0000
20 L A -0.5671
21 A A -1.7068
22 G A -2.5201
23 N A -2.6862
24 D A 0.0000
25 L A 0.3145
26 L A 0.0000
27 L A 0.8727
28 G A 0.0000
29 G A -0.8386
30 A A -1.3878
31 G A -1.8218
32 D A -2.4958
33 D A 0.0000
34 L A 0.1432
35 L A 0.0000
36 L A 0.4881
37 G A 0.0000
38 D A -1.5373
39 E A -2.4196
40 G A -2.4387
41 S A -2.1912
42 D A 0.0000
43 V A 0.0483
44 L A 0.0000
45 D A -0.1568
46 G A 0.0000
47 D A -1.2701
48 A A -1.1158
49 G A -1.8878
50 N A -2.4829
51 D A 0.0000
52 V A -0.3475
53 L A 0.0000
54 D A -0.2085
55 G A 0.0000
56 G A -1.6258
57 Q A -2.7084
58 G A -2.6277
59 D A -2.7915
60 D A 0.0000
61 R A -1.4858
62 Y A 0.0000
63 V A 0.0000
64 F A 0.0000
65 G A 0.0000
66 V A 1.0019
67 G A -0.1540
68 Y A -0.6745
69 G A -1.6063
70 H A -2.1663
71 D A 0.0000
72 R A -1.3407
73 I A 0.0000
74 V A -0.1357
75 E A 0.0000
76 S A -1.2870
77 G A -1.8264
78 G A -2.0314
79 G A -2.1978
80 H A -1.9966
81 D A 0.0000
82 T A 0.0000
83 I A 0.0000
84 R A -2.0608
85 I A 0.0000
86 N A -1.0437
87 A A 0.0000
88 G A -1.6939
89 A A -1.7443
90 D A -2.2458
91 Q A -1.9144
92 L A 0.0000
93 W A -0.3467
94 F A 0.0000
95 A A -1.7714
96 R A -3.1782
97 Q A -2.8711
98 G A -2.4360
99 N A -2.9213
100 D A -2.7113
101 L A 0.0000
102 E A -1.8022
103 I A 0.0000
104 R A -0.7703
105 I A 0.0000
106 L A -0.2947
107 G A -0.5303
108 T A -0.8106
109 D A -1.8196
110 D A 0.0000
111 A A -1.0446
112 L A 0.0000
113 T A -1.2779
114 V A 0.0000
115 H A -1.6352
116 D A -2.3503
117 W A 0.0000
118 Y A -2.2973
119 R A -3.0136
120 D A -2.3583
121 A A -1.9111
122 D A -2.7233
123 H A -2.1037
124 R A -1.7464
125 V A 0.0000
126 E A -1.6078
127 I A -1.4231
128 I A 0.0000
129 H A -1.6675
130 A A 0.0000
131 A A -1.5101
132 N A -2.0812
133 Q A -1.9877
134 A A -1.4181
135 V A 0.0000
136 D A -2.3408
137 Q A -2.0350
138 A A -1.4701
139 G A -1.7253
140 I A 0.0000
141 E A -2.3150
142 K A -2.5014
143 L A -1.2969
144 V A 0.0000
145 E A -2.7210
146 A A -1.3249
147 M A -0.9455
148 A A -1.2931
149 Q A -1.1229
150 Y A 0.0140
151 P A -0.7372
152 D A -1.6762
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Laboratory of Theory of Biopolymers 2018