| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | SM21C,LG18C,SW120C,VF118C |
| Energy difference between WT (input) and mutated protein (by FoldX) | 10.3648 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:24)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:45)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:09)
[INFO] Main: Simulation completed successfully. (00:01:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | C | -2.0063 | |
| 2 | V | C | -0.9165 | |
| 3 | Q | C | -1.2622 | |
| 4 | L | C | 0.0000 | |
| 5 | V | C | 0.5584 | |
| 6 | E | C | 0.2600 | |
| 7 | S | C | -0.3375 | |
| 8 | G | C | -0.9112 | |
| 9 | G | C | -0.2575 | |
| 10 | G | C | 0.7201 | |
| 11 | L | C | 1.3689 | |
| 12 | V | C | 0.1023 | |
| 13 | Q | C | -0.9968 | |
| 14 | P | C | -1.0927 | |
| 15 | G | C | -1.3728 | |
| 16 | G | C | -0.9802 | |
| 17 | S | C | -1.3426 | |
| 18 | G | C | -1.2962 | mutated: LG18C |
| 19 | R | C | -2.2856 | |
| 20 | L | C | 0.0000 | |
| 21 | M | C | -0.3212 | mutated: SM21C |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.1809 | |
| 24 | A | C | 0.0000 | |
| 25 | S | C | -0.2151 | |
| 26 | D | C | 0.0000 | |
| 27 | F | C | 1.5458 | |
| 28 | T | C | 0.2527 | |
| 29 | F | C | 0.0000 | |
| 30 | R | C | -2.0319 | |
| 31 | S | C | -0.8861 | |
| 32 | Y | C | -1.2160 | |
| 33 | E | C | -1.1454 | |
| 34 | M | C | 0.0000 | |
| 35 | S | C | 0.0000 | |
| 36 | W | C | 0.0000 | |
| 37 | V | C | 0.0000 | |
| 38 | R | C | 0.0000 | |
| 39 | Q | C | -0.2986 | |
| 40 | A | C | -0.9863 | |
| 41 | P | C | -1.2936 | |
| 42 | G | C | -1.4347 | |
| 43 | K | C | -2.1362 | |
| 44 | G | C | -1.0612 | |
| 45 | L | C | 0.3908 | |
| 46 | E | C | -0.3994 | |
| 47 | W | C | 0.3362 | |
| 48 | V | C | 0.0000 | |
| 49 | S | C | 0.0000 | |
| 50 | A | C | 0.0000 | |
| 51 | I | C | 0.0000 | |
| 52 | S | C | -0.5832 | |
| 53 | G | C | -1.2444 | |
| 54 | S | C | -1.2283 | |
| 55 | G | C | -1.0815 | |
| 56 | G | C | -0.7345 | |
| 57 | S | C | -0.3026 | |
| 58 | T | C | 0.1984 | |
| 59 | Y | C | 0.6071 | |
| 60 | Y | C | -0.3573 | |
| 61 | A | C | -1.1408 | |
| 62 | D | C | -2.3454 | |
| 63 | S | C | -1.7169 | |
| 64 | V | C | 0.0000 | |
| 65 | K | C | -2.3855 | |
| 66 | G | C | -1.6178 | |
| 67 | R | C | 0.0000 | |
| 68 | F | C | 0.0000 | |
| 69 | T | C | -0.6947 | |
| 70 | I | C | 0.0000 | |
| 71 | S | C | -0.5775 | |
| 72 | R | C | -1.3668 | |
| 73 | D | C | -2.0011 | |
| 74 | N | C | -2.1883 | |
| 75 | S | C | -1.7897 | |
| 76 | K | C | -2.3192 | |
| 77 | N | C | -1.6541 | |
| 78 | T | C | 0.0000 | |
| 79 | L | C | 0.0000 | |
| 80 | Y | C | 0.0000 | |
| 81 | L | C | 0.0000 | |
| 82 | Q | C | -1.3076 | |
| 83 | M | C | 0.0000 | |
| 84 | N | C | -1.3902 | |
| 85 | S | C | -1.2501 | |
| 86 | L | C | 0.0000 | |
| 87 | R | C | -2.1723 | |
| 88 | A | C | -1.3931 | |
| 89 | E | C | -2.1478 | |
| 90 | D | C | 0.0000 | |
| 91 | T | C | -0.2786 | |
| 92 | A | C | 0.0000 | |
| 93 | I | C | 1.0382 | |
| 94 | Y | C | 0.0000 | |
| 95 | Y | C | 0.6367 | |
| 96 | C | C | 0.0000 | |
| 97 | A | C | 0.0000 | |
| 98 | R | C | 0.0000 | |
| 99 | L | C | 0.0000 | |
| 100 | R | C | -3.1907 | |
| 101 | D | C | -3.3333 | |
| 102 | G | C | -2.0866 | |
| 103 | F | C | -1.2310 | |
| 104 | N | C | -2.4286 | |
| 105 | K | C | -3.1848 | |
| 106 | G | C | -1.9076 | |
| 107 | F | C | -0.9859 | |
| 108 | D | C | -1.0994 | |
| 109 | Y | C | -0.2104 | |
| 110 | W | C | 0.5480 | |
| 111 | G | C | -0.0929 | |
| 112 | Q | C | -0.8885 | |
| 113 | G | C | 0.0806 | |
| 114 | T | C | 0.5453 | |
| 115 | L | C | 1.6805 | |
| 116 | V | C | 0.0000 | |
| 117 | T | C | 0.4514 | |
| 118 | F | C | 0.0000 | mutated: VF118C |
| 119 | S | C | -0.0701 | |
| 120 | W | C | 0.3599 | mutated: SW120C |