| Chain sequence(s) |
L: KYNDLDLVFCEPD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:03)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:03)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:03)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 287 | K | L | -1.4526 | |
| 288 | Y | L | 0.7630 | |
| 289 | N | L | -1.3611 | |
| 290 | D | L | -1.7372 | |
| 291 | L | L | 0.8967 | |
| 292 | D | L | -1.2334 | |
| 293 | L | L | 1.5482 | |
| 294 | V | L | 2.4104 | |
| 295 | F | L | 2.4007 | |
| 296 | C | L | 0.7575 | |
| 297 | E | L | -1.7327 | |
| 298 | P | L | -0.9039 | |
| 299 | D | L | -1.8352 |