| Chain sequence(s) |
A: PADPEIVEGLPIPLAVAGHHQPAPFYLTADMFGGLPVQLAGGELSTLVGKPVAAPHTHPVDELYLLVSPNKGGARIEVQLDGRRHELLSPAVMRIPAGSEHCFLTLEAEVGSYCFGILLGDRL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:59)
[INFO] Main: Simulation completed successfully. (00:01:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 7 | P | A | -0.6031 | |
| 8 | A | A | -0.7860 | |
| 9 | D | A | -1.5084 | |
| 10 | P | A | -0.8346 | |
| 11 | E | A | -1.0598 | |
| 12 | I | A | 0.4133 | |
| 13 | V | A | 0.2654 | |
| 14 | E | A | -1.1691 | |
| 15 | G | A | -0.4765 | |
| 16 | L | A | 0.2328 | |
| 17 | P | A | 0.3133 | |
| 18 | I | A | 0.6306 | |
| 19 | P | A | 0.0758 | |
| 20 | L | A | 0.2469 | |
| 21 | A | A | -0.1307 | |
| 22 | V | A | 0.0248 | |
| 23 | A | A | -0.1265 | |
| 24 | G | A | -0.4910 | |
| 25 | H | A | -0.8596 | |
| 26 | H | A | -1.5612 | |
| 27 | Q | A | -1.6413 | |
| 28 | P | A | -0.7260 | |
| 29 | A | A | 0.0000 | |
| 30 | P | A | 0.1332 | |
| 31 | F | A | 0.0000 | |
| 32 | Y | A | 0.6489 | |
| 33 | L | A | 0.9112 | |
| 34 | T | A | 0.0000 | |
| 35 | A | A | -1.4328 | |
| 36 | D | A | -1.8191 | |
| 37 | M | A | -0.3282 | |
| 38 | F | A | 0.7086 | |
| 39 | G | A | -0.3787 | |
| 40 | G | A | -1.0144 | |
| 41 | L | A | -0.5085 | |
| 42 | P | A | -0.8468 | |
| 43 | V | A | -0.2628 | |
| 44 | Q | A | 0.0000 | |
| 45 | L | A | 0.9331 | |
| 46 | A | A | 0.4802 | |
| 47 | G | A | 0.2171 | |
| 48 | G | A | -0.1975 | |
| 49 | E | A | -0.1720 | |
| 50 | L | A | 0.0000 | |
| 51 | S | A | 0.2880 | |
| 52 | T | A | 0.1087 | |
| 53 | L | A | -0.1441 | |
| 54 | V | A | -0.0550 | |
| 55 | G | A | -0.7228 | |
| 56 | K | A | -1.2801 | |
| 57 | P | A | -0.5443 | |
| 58 | V | A | -0.2797 | |
| 59 | A | A | -0.4088 | |
| 60 | A | A | -0.3648 | |
| 61 | P | A | -0.9911 | |
| 62 | H | A | -1.0072 | |
| 63 | T | A | -0.9192 | |
| 64 | H | A | 0.0000 | |
| 65 | P | A | -0.6123 | |
| 66 | V | A | -0.4294 | |
| 67 | D | A | -0.4839 | |
| 68 | E | A | 0.0000 | |
| 69 | L | A | 0.4953 | |
| 70 | Y | A | 0.0000 | |
| 71 | L | A | 1.4511 | |
| 72 | L | A | 0.0000 | |
| 73 | V | A | 0.4977 | |
| 74 | S | A | -0.5098 | |
| 75 | P | A | -1.0195 | |
| 76 | N | A | -2.1962 | |
| 77 | K | A | -2.3737 | |
| 78 | G | A | -1.5225 | |
| 79 | G | A | -1.3684 | |
| 80 | A | A | 0.0000 | |
| 81 | R | A | -0.5923 | |
| 82 | I | A | 0.0000 | |
| 83 | E | A | 0.0000 | |
| 84 | V | A | 0.0000 | |
| 85 | Q | A | -2.6219 | |
| 86 | L | A | 0.0000 | |
| 87 | D | A | -3.3401 | |
| 88 | G | A | -3.0490 | |
| 89 | R | A | -3.6450 | |
| 90 | R | A | -3.5498 | |
| 91 | H | A | -2.1833 | |
| 92 | E | A | -1.0714 | |
| 93 | L | A | 0.4701 | |
| 94 | L | A | 0.5550 | |
| 95 | S | A | 0.0000 | |
| 96 | P | A | 0.1140 | |
| 97 | A | A | 1.2157 | |
| 98 | V | A | 1.9387 | |
| 99 | M | A | 0.1862 | |
| 100 | R | A | -1.2162 | |
| 101 | I | A | 0.0000 | |
| 102 | P | A | -0.9486 | |
| 103 | A | A | -0.7417 | |
| 104 | G | A | -1.1568 | |
| 105 | S | A | -1.6371 | |
| 106 | E | A | -2.4274 | |
| 107 | H | A | 0.0000 | |
| 108 | C | A | 0.0000 | |
| 109 | F | A | -0.1761 | |
| 110 | L | A | -0.1276 | |
| 111 | T | A | 0.0000 | |
| 112 | L | A | -0.4787 | |
| 113 | E | A | -1.4008 | |
| 114 | A | A | -0.4565 | |
| 115 | E | A | -0.1529 | |
| 116 | V | A | 1.2487 | |
| 117 | G | A | 0.4000 | |
| 118 | S | A | 0.0000 | |
| 119 | Y | A | 0.6137 | |
| 120 | C | A | 0.0000 | |
| 121 | F | A | 0.9883 | |
| 122 | G | A | 0.0000 | |
| 123 | I | A | 0.8032 | |
| 124 | L | A | 0.0000 | |
| 125 | L | A | 0.2975 | |
| 126 | G | A | -0.9212 | |
| 127 | D | A | -2.5810 | |
| 128 | R | A | -2.1535 | |
| 129 | L | A | -0.2936 |