Project name: query_structure

Status: done

Started: 2026-03-16 23:23:20
Settings
Chain sequence(s) A: GIPCAESCVWIPCTVTALVGCSCSDKVCYN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:11)
Show buried residues

Minimal score value
-2.1971
Maximal score value
2.8033
Average score
0.6981
Total score value
20.9439

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.1269
2 I A 1.4766
3 P A 0.6000
4 C A 0.6509
5 A A 0.1755
6 E A 0.3742
7 S A 0.3687
8 C A 0.8950
9 V A 1.3258
10 W A 2.3302
11 I A 2.5765
12 P A 1.3828
13 C A 1.5255
14 T A 1.6310
15 V A 2.4633
16 T A 1.6958
17 A A 1.5979
18 L A 2.8033
19 V A 2.4315
20 G A 0.7281
21 C A 0.0000
22 S A -0.3047
23 C A -0.0843
24 S A -1.1657
25 D A -2.1971
26 K A -1.4507
27 V A -0.4804
28 C A 0.0000
29 Y A -0.1423
30 N A -0.3904
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Laboratory of Theory of Biopolymers 2018