| Chain sequence(s) |
A: MYGIEYTTTLNSLISLLLMNYILKTTTRAMDYIIYRFLMMMTILSPFVNAQNYGINLPITGSMDTAYANSTQEEPFLTSTLCLYYPTEASTEINDNEWKDTLSQLFLTKGWPTGSVYFKEYTDIASFSVDPQLYCDYNIVLMKYDSTLELDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLGIGCLTTDTNTFEEVATAEKLVITDVVDGVNHKLNVTTTTCTIRNCKKLGPRENVAVIQVGGSNILDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVNQIVQVMSKRSRSLNSAAFYYRV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | IV43A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.765891 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:01:51)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:57)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:50)
[INFO] Main: Simulation completed successfully. (00:03:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.7186 | |
| 2 | Y | A | 1.9304 | |
| 3 | G | A | 1.2763 | |
| 4 | I | A | 1.8999 | |
| 5 | E | A | 0.1929 | |
| 6 | Y | A | 1.0424 | |
| 7 | T | A | 0.6016 | |
| 8 | T | A | 0.0782 | |
| 9 | T | A | 0.3346 | |
| 10 | L | A | 0.6686 | |
| 11 | N | A | -0.0407 | |
| 12 | S | A | 0.8163 | |
| 13 | L | A | 2.0378 | |
| 14 | I | A | 2.2435 | |
| 15 | S | A | 1.9301 | |
| 16 | L | A | 3.0821 | |
| 17 | L | A | 3.0332 | |
| 18 | L | A | 3.4172 | |
| 19 | M | A | 3.0596 | |
| 20 | N | A | 2.2099 | |
| 21 | Y | A | 2.8288 | |
| 22 | I | A | 2.8827 | |
| 23 | L | A | 1.7558 | |
| 24 | K | A | 0.1523 | |
| 25 | T | A | 0.0622 | |
| 26 | T | A | 0.1441 | |
| 27 | T | A | -0.2992 | |
| 28 | R | A | -1.2625 | |
| 29 | A | A | 0.2418 | |
| 30 | M | A | 0.7647 | |
| 31 | D | A | 0.5455 | |
| 32 | Y | A | 1.8049 | |
| 33 | I | A | 2.7249 | |
| 34 | I | A | 2.7905 | |
| 35 | Y | A | 2.8350 | |
| 36 | R | A | 1.4873 | |
| 37 | F | A | 3.0858 | |
| 38 | L | A | 3.1540 | |
| 39 | M | A | 2.7454 | |
| 40 | M | A | 2.4818 | |
| 41 | M | A | 2.6373 | |
| 42 | T | A | 2.0586 | |
| 43 | V | A | 2.8404 | mutated: IV43A |
| 44 | L | A | 2.8006 | |
| 45 | S | A | 1.8002 | |
| 46 | P | A | 1.4532 | |
| 47 | F | A | 2.8217 | |
| 48 | V | A | 2.2014 | |
| 49 | N | A | -0.4436 | |
| 50 | A | A | -0.6157 | |
| 51 | Q | A | -1.5829 | |
| 52 | N | A | -1.4136 | |
| 53 | Y | A | 0.2958 | |
| 54 | G | A | -0.2200 | |
| 55 | I | A | 0.7821 | |
| 56 | N | A | 0.0598 | |
| 57 | L | A | 1.2618 | |
| 58 | P | A | 0.8924 | |
| 59 | I | A | 1.9710 | |
| 60 | T | A | 0.6014 | |
| 61 | G | A | -0.1655 | |
| 62 | S | A | -0.5251 | |
| 63 | M | A | -0.3010 | |
| 64 | D | A | -1.8601 | |
| 65 | T | A | -0.4545 | |
| 66 | A | A | -0.1698 | |
| 67 | Y | A | 0.3871 | |
| 68 | A | A | -0.1150 | |
| 69 | N | A | -1.6350 | |
| 70 | S | A | -1.7320 | |
| 71 | T | A | -1.9574 | |
| 72 | Q | A | -3.1216 | |
| 73 | E | A | -3.1836 | |
| 74 | E | A | -2.5857 | |
| 75 | P | A | -1.6205 | |
| 76 | F | A | -0.1568 | |
| 77 | L | A | 1.0086 | |
| 78 | T | A | 0.5213 | |
| 79 | S | A | 0.0000 | |
| 80 | T | A | 0.1954 | |
| 81 | L | A | 0.0000 | |
| 82 | C | A | 0.0000 | |
| 83 | L | A | 0.0000 | |
| 84 | Y | A | 0.0000 | |
| 85 | Y | A | 0.0000 | |
| 86 | P | A | 0.0000 | |
| 87 | T | A | -1.0297 | |
| 88 | E | A | -1.3378 | |
| 89 | A | A | 0.0000 | |
| 90 | S | A | -1.3569 | |
| 91 | T | A | -1.2552 | |
| 92 | E | A | -1.5880 | |
| 93 | I | A | -1.6492 | |
| 94 | N | A | -2.4792 | |
| 95 | D | A | -2.8488 | |
| 96 | N | A | -3.2324 | |
| 97 | E | A | -3.6636 | |
| 98 | W | A | 0.0000 | |
| 99 | K | A | -2.5056 | |
| 100 | D | A | -3.2394 | |
| 101 | T | A | -2.0683 | |
| 102 | L | A | 0.0000 | |
| 103 | S | A | -1.4200 | |
| 104 | Q | A | -1.5786 | |
| 105 | L | A | -0.6672 | |
| 106 | F | A | 0.0000 | |
| 107 | L | A | -0.1604 | |
| 108 | T | A | -0.5254 | |
| 109 | K | A | -1.0410 | |
| 110 | G | A | -0.5252 | |
| 111 | W | A | 0.0000 | |
| 112 | P | A | -0.0690 | |
| 113 | T | A | -0.6026 | |
| 114 | G | A | -0.5936 | |
| 115 | S | A | 0.2257 | |
| 116 | V | A | 0.2519 | |
| 117 | Y | A | 0.3401 | |
| 118 | F | A | 0.0000 | |
| 119 | K | A | -0.9354 | |
| 120 | E | A | -1.3322 | |
| 121 | Y | A | 0.0000 | |
| 122 | T | A | -0.8028 | |
| 123 | D | A | -0.9297 | |
| 124 | I | A | 0.0000 | |
| 125 | A | A | -0.5203 | |
| 126 | S | A | -0.7239 | |
| 127 | F | A | 0.0000 | |
| 128 | S | A | 0.0000 | |
| 129 | V | A | -0.4825 | |
| 130 | D | A | -1.8895 | |
| 131 | P | A | -1.2654 | |
| 132 | Q | A | -1.5007 | |
| 133 | L | A | 0.0000 | |
| 134 | Y | A | 0.6963 | |
| 135 | C | A | 0.0000 | |
| 136 | D | A | -0.8171 | |
| 137 | Y | A | 0.0000 | |
| 138 | N | A | 0.0000 | |
| 139 | I | A | 0.0000 | |
| 140 | V | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | M | A | 0.0000 | |
| 143 | K | A | -0.8363 | |
| 144 | Y | A | -0.8574 | |
| 145 | D | A | -1.1650 | |
| 146 | S | A | -1.1292 | |
| 147 | T | A | -0.6634 | |
| 148 | L | A | -1.1112 | |
| 149 | E | A | -2.3753 | |
| 150 | L | A | 0.0000 | |
| 151 | D | A | -2.3052 | |
| 152 | M | A | 0.0000 | |
| 153 | S | A | -0.9283 | |
| 154 | E | A | -1.0273 | |
| 155 | L | A | 0.0000 | |
| 156 | A | A | -0.7303 | |
| 157 | D | A | -1.1293 | |
| 158 | L | A | 0.0000 | |
| 159 | I | A | 0.0000 | |
| 160 | L | A | -0.5994 | |
| 161 | N | A | -0.6201 | |
| 162 | E | A | -0.6062 | |
| 163 | W | A | 0.0000 | |
| 164 | L | A | 0.5929 | |
| 165 | C | A | -0.2685 | |
| 166 | N | A | -1.5042 | |
| 167 | P | A | -1.4562 | |
| 168 | M | A | 0.0000 | |
| 169 | D | A | -1.3699 | |
| 170 | I | A | -0.0874 | |
| 171 | T | A | 0.3575 | |
| 172 | L | A | 1.4527 | |
| 173 | Y | A | 1.9113 | |
| 174 | Y | A | 1.2780 | |
| 175 | Y | A | 0.2758 | |
| 176 | Q | A | -0.8436 | |
| 177 | Q | A | 0.0000 | |
| 178 | T | A | -1.3751 | |
| 179 | D | A | -1.9790 | |
| 180 | E | A | -2.7119 | |
| 181 | A | A | -1.8493 | |
| 182 | N | A | 0.0000 | |
| 183 | K | A | -1.8208 | |
| 184 | W | A | 0.0000 | |
| 185 | I | A | 0.0000 | |
| 186 | S | A | 0.0000 | |
| 187 | M | A | 0.0000 | |
| 188 | G | A | -0.6332 | |
| 189 | S | A | -0.6439 | |
| 190 | S | A | -0.6535 | |
| 191 | C | A | 0.0000 | |
| 192 | T | A | -0.5878 | |
| 193 | I | A | 0.0000 | |
| 194 | K | A | -1.7111 | |
| 195 | V | A | 0.0000 | |
| 196 | C | A | 0.0000 | |
| 197 | P | A | 0.6831 | |
| 198 | L | A | 0.0000 | |
| 199 | N | A | 0.0481 | |
| 200 | T | A | -0.5808 | |
| 201 | Q | A | -0.9145 | |
| 202 | T | A | 0.3465 | |
| 203 | L | A | 1.5279 | |
| 204 | G | A | 1.4410 | |
| 205 | I | A | 2.1268 | |
| 206 | G | A | 0.7208 | |
| 207 | C | A | 0.7251 | |
| 208 | L | A | 1.6363 | |
| 209 | T | A | 0.8980 | |
| 210 | T | A | 0.1036 | |
| 211 | D | A | -0.5833 | |
| 212 | T | A | -1.2884 | |
| 213 | N | A | -1.8706 | |
| 214 | T | A | -1.1855 | |
| 215 | F | A | 0.0000 | |
| 216 | E | A | -2.8017 | |
| 217 | E | A | -2.4705 | |
| 218 | V | A | -0.7444 | |
| 219 | A | A | 0.0000 | |
| 220 | T | A | -0.5146 | |
| 221 | A | A | -0.7162 | |
| 222 | E | A | -1.4462 | |
| 223 | K | A | -1.4085 | |
| 224 | L | A | 0.0000 | |
| 225 | V | A | 0.0000 | |
| 226 | I | A | -0.4091 | |
| 227 | T | A | 0.0000 | |
| 228 | D | A | -1.7303 | |
| 229 | V | A | -0.6273 | |
| 230 | V | A | 0.1123 | |
| 231 | D | A | -1.9802 | |
| 232 | G | A | -1.0064 | |
| 233 | V | A | -0.1708 | |
| 234 | N | A | -0.1125 | |
| 235 | H | A | 0.0000 | |
| 236 | K | A | 0.1523 | |
| 237 | L | A | 0.0000 | |
| 238 | N | A | -1.2237 | |
| 239 | V | A | 0.0000 | |
| 240 | T | A | -0.2392 | |
| 241 | T | A | -0.1866 | |
| 242 | T | A | -0.1988 | |
| 243 | T | A | -0.3162 | |
| 244 | C | A | 0.0000 | |
| 245 | T | A | -0.4503 | |
| 246 | I | A | 0.0000 | |
| 247 | R | A | -1.1960 | |
| 248 | N | A | -1.1797 | |
| 249 | C | A | 0.0000 | |
| 250 | K | A | -1.2423 | |
| 251 | K | A | -0.9970 | |
| 252 | L | A | 0.4021 | |
| 253 | G | A | -0.2532 | |
| 254 | P | A | -0.8804 | |
| 255 | R | A | -1.0657 | |
| 256 | E | A | -1.4035 | |
| 257 | N | A | 0.0000 | |
| 258 | V | A | 0.0000 | |
| 259 | A | A | -0.1223 | |
| 260 | V | A | -0.0696 | |
| 261 | I | A | 0.0000 | |
| 262 | Q | A | -0.6023 | |
| 263 | V | A | 0.0000 | |
| 264 | G | A | -1.6101 | |
| 265 | G | A | -1.0396 | |
| 266 | S | A | -0.4576 | |
| 267 | N | A | -0.7681 | |
| 268 | I | A | 1.2662 | |
| 269 | L | A | 0.8497 | |
| 270 | D | A | -0.3816 | |
| 271 | I | A | 0.6361 | |
| 272 | T | A | -0.3917 | |
| 273 | A | A | -0.9670 | |
| 274 | D | A | -1.7348 | |
| 275 | P | A | -1.1334 | |
| 276 | T | A | -0.8019 | |
| 277 | T | A | -0.7656 | |
| 278 | A | A | -0.5866 | |
| 279 | P | A | -0.9630 | |
| 280 | Q | A | -1.9597 | |
| 281 | T | A | -1.6321 | |
| 282 | E | A | -2.3738 | |
| 283 | R | A | -1.9385 | |
| 284 | M | A | -0.6302 | |
| 285 | M | A | -0.7490 | |
| 286 | R | A | -2.0830 | |
| 287 | I | A | 0.0000 | |
| 288 | N | A | -2.3040 | |
| 289 | W | A | -1.9838 | |
| 290 | K | A | -2.5578 | |
| 291 | K | A | -2.3013 | |
| 292 | W | A | 0.0000 | |
| 293 | W | A | -0.4549 | |
| 294 | Q | A | -1.2026 | |
| 295 | V | A | 0.0000 | |
| 296 | F | A | 0.0000 | |
| 297 | Y | A | 0.0689 | |
| 298 | T | A | -0.3770 | |
| 299 | V | A | 0.0000 | |
| 300 | V | A | 0.0000 | |
| 301 | D | A | -1.8588 | |
| 302 | Y | A | -0.8868 | |
| 303 | V | A | 0.0000 | |
| 304 | N | A | -1.4133 | |
| 305 | Q | A | -0.8019 | |
| 306 | I | A | -0.3130 | |
| 307 | V | A | 0.0000 | |
| 308 | Q | A | -0.7179 | |
| 309 | V | A | 0.5105 | |
| 310 | M | A | 0.0000 | |
| 311 | S | A | -1.1823 | |
| 312 | K | A | -2.2187 | |
| 313 | R | A | -1.8394 | |
| 314 | S | A | -1.6593 | |
| 315 | R | A | -2.1631 | |
| 316 | S | A | -0.7369 | |
| 317 | L | A | 0.4481 | |
| 318 | N | A | -0.6401 | |
| 319 | S | A | 0.2387 | |
| 320 | A | A | 0.3245 | |
| 321 | A | A | 1.5055 | |
| 322 | F | A | 2.7765 | |
| 323 | Y | A | 2.6216 | |
| 324 | Y | A | 2.0991 | |
| 325 | R | A | 0.2971 | |
| 326 | V | A | 1.3629 |