| Chain sequence(s) |
A: GSARDDVLIGDAGANVLEGLAGNDVLSGGAGDDHLVGDEGSDLLSGDAGNDYLCGGQGDDTYLFGVGYGHDAISESGGGHDTIRINAGADQLWFARQGNDLEIRILGTDDALTVHDWYRDADHRVEIIHAANQAVDQAGIEKLVEAMAQYPD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:32)
[INFO] Main: Simulation completed successfully. (00:02:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.8785 | |
| 2 | S | A | -1.0559 | |
| 3 | A | A | -1.5411 | |
| 4 | R | A | -2.8284 | |
| 5 | D | A | -2.7718 | |
| 6 | D | A | -0.7388 | |
| 7 | V | A | 1.7627 | |
| 8 | L | A | 1.7031 | |
| 9 | I | A | 2.1735 | |
| 10 | G | A | 0.2118 | |
| 11 | D | A | -1.4721 | |
| 12 | A | A | -1.2331 | |
| 13 | G | A | -1.0609 | |
| 14 | A | A | -0.9944 | |
| 15 | N | A | -0.0943 | |
| 16 | V | A | 1.1181 | |
| 17 | L | A | 0.6303 | |
| 18 | E | A | -0.9183 | |
| 19 | G | A | 0.0000 | |
| 20 | L | A | -1.0435 | |
| 21 | A | A | -1.9362 | |
| 22 | G | A | -2.5062 | |
| 23 | N | A | -2.4753 | |
| 24 | D | A | 0.0000 | |
| 25 | V | A | 1.2178 | |
| 26 | L | A | 0.0000 | |
| 27 | S | A | 0.9530 | |
| 28 | G | A | 0.0000 | |
| 29 | G | A | -0.6666 | |
| 30 | A | A | -1.2740 | |
| 31 | G | A | -1.8030 | |
| 32 | D | A | -2.3559 | |
| 33 | D | A | 0.0000 | |
| 34 | H | A | -0.2040 | |
| 35 | L | A | 0.0000 | |
| 36 | V | A | -0.1315 | |
| 37 | G | A | 0.0000 | |
| 38 | D | A | -1.8738 | |
| 39 | E | A | -2.7187 | |
| 40 | G | A | -2.5865 | |
| 41 | S | A | -2.1233 | |
| 42 | D | A | 0.0000 | |
| 43 | L | A | 0.4790 | |
| 44 | L | A | 0.0000 | |
| 45 | S | A | 0.0000 | |
| 46 | G | A | 0.0000 | |
| 47 | D | A | -0.6544 | |
| 48 | A | A | -0.7703 | |
| 49 | G | A | -1.7028 | |
| 50 | N | A | -2.2965 | |
| 51 | D | A | 0.0000 | |
| 52 | Y | A | -0.0921 | |
| 53 | L | A | 0.0000 | |
| 54 | C | A | -0.2151 | |
| 55 | G | A | 0.0000 | |
| 56 | G | A | -1.6021 | |
| 57 | Q | A | -2.6924 | |
| 58 | G | A | -2.6150 | |
| 59 | D | A | -2.7682 | |
| 60 | D | A | 0.0000 | |
| 61 | T | A | -0.4917 | |
| 62 | Y | A | 0.0000 | |
| 63 | L | A | -0.5822 | |
| 64 | F | A | 0.0000 | |
| 65 | G | A | 0.0000 | |
| 66 | V | A | 1.0229 | |
| 67 | G | A | 0.0013 | |
| 68 | Y | A | -0.3327 | |
| 69 | G | A | -1.3558 | |
| 70 | H | A | -1.8331 | |
| 71 | D | A | 0.0000 | |
| 72 | A | A | -0.3999 | |
| 73 | I | A | 0.0000 | |
| 74 | S | A | -0.2851 | |
| 75 | E | A | 0.0000 | |
| 76 | S | A | -1.3166 | |
| 77 | G | A | -1.8581 | |
| 78 | G | A | -2.0008 | |
| 79 | G | A | -2.3070 | |
| 80 | H | A | -2.1172 | |
| 81 | D | A | 0.0000 | |
| 82 | T | A | -1.2132 | |
| 83 | I | A | 0.0000 | |
| 84 | R | A | -2.0411 | |
| 85 | I | A | 0.0000 | |
| 86 | N | A | -1.4576 | |
| 87 | A | A | 0.0000 | |
| 88 | G | A | -1.7720 | |
| 89 | A | A | -1.7446 | |
| 90 | D | A | -2.2367 | |
| 91 | Q | A | -1.8886 | |
| 92 | L | A | 0.0000 | |
| 93 | W | A | -0.2243 | |
| 94 | F | A | 0.0000 | |
| 95 | A | A | -1.5883 | |
| 96 | R | A | -3.0292 | |
| 97 | Q | A | -2.7135 | |
| 98 | G | A | -2.4603 | |
| 99 | N | A | -3.1389 | |
| 100 | D | A | -2.6337 | |
| 101 | L | A | 0.0000 | |
| 102 | E | A | -1.3604 | |
| 103 | I | A | 0.0000 | |
| 104 | R | A | -0.6011 | |
| 105 | I | A | 0.0000 | |
| 106 | L | A | -0.2339 | |
| 107 | G | A | -0.5021 | |
| 108 | T | A | -0.7677 | |
| 109 | D | A | -1.7746 | |
| 110 | D | A | 0.0000 | |
| 111 | A | A | -0.7705 | |
| 112 | L | A | 0.0000 | |
| 113 | T | A | 0.0000 | |
| 114 | V | A | 0.0000 | |
| 115 | H | A | -1.5763 | |
| 116 | D | A | -2.6228 | |
| 117 | W | A | 0.0000 | |
| 118 | Y | A | -2.4558 | |
| 119 | R | A | -3.2018 | |
| 120 | D | A | -2.5692 | |
| 121 | A | A | -1.9637 | |
| 122 | D | A | -2.8493 | |
| 123 | H | A | -2.3195 | |
| 124 | R | A | -1.9841 | |
| 125 | V | A | 0.0000 | |
| 126 | E | A | -1.8833 | |
| 127 | I | A | -1.1216 | |
| 128 | I | A | 0.0000 | |
| 129 | H | A | -1.7550 | |
| 130 | A | A | 0.0000 | |
| 131 | A | A | -1.6786 | |
| 132 | N | A | -2.1205 | |
| 133 | Q | A | -1.9796 | |
| 134 | A | A | -1.2663 | |
| 135 | V | A | -1.1097 | |
| 136 | D | A | -2.0028 | |
| 137 | Q | A | -1.4793 | |
| 138 | A | A | -1.1548 | |
| 139 | G | A | -1.4018 | |
| 140 | I | A | 0.0000 | |
| 141 | E | A | -2.0923 | |
| 142 | K | A | -2.3440 | |
| 143 | L | A | -1.0596 | |
| 144 | V | A | 0.0000 | |
| 145 | E | A | -2.6591 | |
| 146 | A | A | -1.2715 | |
| 147 | M | A | -0.8887 | |
| 148 | A | A | -1.2488 | |
| 149 | Q | A | -1.1219 | |
| 150 | Y | A | 0.0197 | |
| 151 | P | A | -0.7326 | |
| 152 | D | A | -1.6757 |