Project name: 7654b5ceb78c22a

Status: done

Started: 2024-11-21 06:43:45
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Chain sequence(s) A: KFNKEQQNAFYEILHLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKKLNEQQAAFYEILSLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKKLNEQQAAFYEILHLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKKLNEQQAAFYEILHLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKKLNDAQA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:32)
Show buried residues

Minimal score value
-3.9312
Maximal score value
0.9535
Average score
-1.7994
Total score value
-338.2869

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
34 K A -2.0259
35 F A -2.1983
36 N A -3.0891
37 K A -3.6262
38 E A -3.5058
39 Q A -2.9344
40 Q A -2.7783
41 N A -2.4205
42 A A 0.0000
43 F A -0.3605
44 Y A -0.0405
45 E A -0.9532
46 I A 0.0000
47 L A -0.4218
48 H A -0.8324
49 L A -1.0494
50 P A -0.9210
51 N A -1.1706
52 L A -2.0051
53 N A -2.8129
54 E A -3.7784
55 E A -3.6924
56 Q A -2.5907
57 R A -2.9833
58 N A -3.1374
59 A A -2.0990
60 F A -1.5189
61 I A -1.5494
62 Q A -2.7254
63 S A -2.2398
64 L A 0.0000
65 K A -3.4103
66 D A -3.4240
67 D A -2.5779
68 P A -2.4043
69 S A -1.6755
70 Q A -1.8580
71 S A -1.5369
72 A A -1.3710
73 N A -1.9729
74 L A -1.4646
75 L A -1.3656
76 A A -1.9651
77 E A -3.1050
78 A A 0.0000
79 K A -3.0963
80 K A -3.4990
81 L A -2.2440
82 N A -2.4015
83 E A -3.0087
84 Q A -1.8430
85 Q A -1.1836
86 A A -0.8388
87 A A 0.0000
88 F A 0.1849
89 Y A 0.9535
90 E A -0.5352
91 I A 0.0000
92 L A 0.4199
93 S A 0.0040
94 L A -0.6505
95 P A -0.6374
96 N A -1.2461
97 L A 0.0000
98 N A -2.7252
99 E A -3.5589
100 E A -3.5132
101 Q A -2.4924
102 R A -2.4216
103 N A -2.8526
104 A A -2.1576
105 F A 0.0000
106 I A 0.0000
107 Q A -2.8095
108 S A -2.3716
109 L A 0.0000
110 K A -3.3679
111 D A -3.5120
112 D A -2.8816
113 P A -2.1777
114 S A -1.9632
115 Q A -1.5938
116 S A 0.0000
117 A A -1.2546
118 N A -1.9414
119 L A -1.4902
120 L A -1.2744
121 A A -1.8910
122 E A -3.0871
123 A A 0.0000
124 K A -3.1491
125 K A -3.4487
126 L A -2.1413
127 N A 0.0000
128 E A -2.9720
129 Q A -1.9916
130 Q A -1.1993
131 A A -1.0733
132 A A 0.0000
133 F A -0.1760
134 Y A 0.1500
135 E A -1.3788
136 I A 0.0000
137 L A -0.6642
138 H A -1.1450
139 L A -1.2737
140 P A -1.0259
141 N A -1.2591
142 L A -2.1056
143 N A -2.9000
144 E A -3.9312
145 E A -3.8739
146 Q A -3.0207
147 R A -3.2950
148 N A -3.3520
149 A A -2.3923
150 F A 0.0000
151 I A -1.9300
152 Q A -2.7943
153 S A -2.2769
154 L A 0.0000
155 K A -3.2697
156 D A -3.3909
157 D A -2.5448
158 P A -1.9925
159 S A -1.6610
160 Q A -1.9144
161 S A -1.7429
162 A A -1.2843
163 N A -1.8088
164 L A -1.5365
165 L A -1.4787
166 A A -1.9340
167 E A -3.0027
168 A A 0.0000
169 K A -3.0897
170 K A -3.3929
171 L A -2.2085
172 N A -2.3953
173 E A -2.9482
174 Q A -2.0667
175 Q A -1.3857
176 A A -1.1293
177 A A 0.0000
178 F A -0.4642
179 Y A 0.0856
180 E A -1.3715
181 I A 0.0000
182 L A -0.4069
183 H A -1.0580
184 L A 0.0000
185 P A -1.2831
186 N A -1.6019
187 L A 0.0000
188 N A -2.8310
189 E A -3.4700
190 E A -3.4357
191 Q A -2.2176
192 R A -2.3118
193 N A -2.4934
194 A A -1.5552
195 F A 0.0000
196 I A -1.6233
197 Q A -2.6650
198 S A -2.3422
199 L A 0.0000
200 K A -3.5125
201 D A -3.7123
202 D A -3.1671
203 P A -2.6388
204 S A -1.9714
205 Q A -1.9643
206 S A 0.0000
207 A A -1.4139
208 N A -1.9349
209 L A -1.5697
210 L A -1.5328
211 A A -2.0227
212 E A -3.1406
213 A A 0.0000
214 K A -3.4597
215 K A -3.4709
216 L A -2.2052
217 N A -2.6380
218 D A -3.1039
219 A A -1.7549
220 Q A -1.7438
221 A A -0.9359
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Laboratory of Theory of Biopolymers 2018