| Chain sequence(s) |
K: DVQITQSPSYLAASPGETITINCRASKSISKYLAWYQEKPGKTNELLIYSGSTLQSGIPSRFRGSGSGTDFTLTISSLEPEDFAMYYCQQHNEYTLTFGGGTK
L: DVQLQESGPGLVKPSQSLSLTCTVSGYSITSDYAWNWIRQFPGNKLEWMGYISYTLTTGYNPSLKSRISITRDSSKNQFFLQLNSVTTEDTATYYCARSGWLLPYWYFDVWGAGTTVTVSS input PDB |
| Selected Chain(s) | L,K |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:40)
[INFO] Main: Simulation completed successfully. (00:01:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | L | -2.1083 | |
| 2 | V | L | -1.3865 | |
| 3 | Q | L | -1.9230 | |
| 4 | L | L | 0.0000 | |
| 5 | Q | L | -1.5747 | |
| 6 | E | L | 0.0000 | |
| 7 | S | L | -0.6803 | |
| 8 | G | L | -0.3402 | |
| 9 | P | L | -0.0097 | |
| 11 | G | L | 0.2660 | |
| 12 | L | L | 0.9779 | |
| 13 | V | L | -0.3798 | |
| 14 | K | L | -1.8211 | |
| 15 | P | L | -1.7164 | |
| 16 | S | L | -1.6133 | |
| 17 | Q | L | -2.2635 | |
| 18 | S | L | -1.9734 | |
| 19 | L | L | 0.0000 | |
| 20 | S | L | -0.6032 | |
| 21 | L | L | 0.0000 | |
| 22 | T | L | -0.3642 | |
| 23 | C | L | 0.0000 | |
| 24 | T | L | -1.1188 | |
| 25 | V | L | 0.0000 | |
| 26 | S | L | -1.4049 | |
| 27 | G | L | -1.2462 | |
| 28 | Y | L | -0.6765 | |
| 29 | S | L | -0.5033 | |
| 30 | I | L | 0.0000 | |
| 31 | T | L | -0.1140 | |
| 35 | S | L | -0.3358 | |
| 36 | D | L | -0.2522 | |
| 37 | Y | L | 0.6641 | |
| 38 | A | L | 0.0000 | |
| 39 | W | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | I | L | 0.0000 | |
| 43 | R | L | 0.0000 | |
| 44 | Q | L | -0.9077 | |
| 45 | F | L | -1.0454 | |
| 46 | P | L | -1.0909 | |
| 47 | G | L | -1.3475 | |
| 48 | N | L | -1.6516 | |
| 49 | K | L | -2.1900 | |
| 50 | L | L | -1.0831 | |
| 51 | E | L | -0.6283 | |
| 52 | W | L | 0.0000 | |
| 53 | M | L | 0.0000 | |
| 54 | G | L | 0.0000 | |
| 55 | Y | L | 0.2965 | |
| 56 | I | L | 0.0000 | |
| 57 | S | L | 0.0000 | |
| 58 | Y | L | 0.6908 | |
| 59 | T | L | 0.9017 | |
| 63 | L | L | 1.5490 | |
| 64 | T | L | 0.8100 | |
| 65 | T | L | 0.3996 | |
| 66 | G | L | -0.2046 | |
| 67 | Y | L | -0.4355 | |
| 68 | N | L | 0.0000 | |
| 69 | P | L | -0.9441 | |
| 70 | S | L | -0.8977 | |
| 71 | L | L | 0.0000 | |
| 72 | K | L | -2.0357 | |
| 74 | S | L | -1.4557 | |
| 75 | R | L | -1.6142 | |
| 76 | I | L | 0.0000 | |
| 77 | S | L | -0.7944 | |
| 78 | I | L | 0.0256 | |
| 79 | T | L | -0.0311 | |
| 80 | R | L | -0.5868 | |
| 81 | D | L | -1.5592 | |
| 82 | S | L | -1.4108 | |
| 83 | S | L | -1.4595 | |
| 84 | K | L | -2.3451 | |
| 85 | N | L | -1.6296 | |
| 86 | Q | L | -1.2521 | |
| 87 | F | L | 0.0000 | |
| 88 | F | L | -0.0054 | |
| 89 | L | L | 0.0000 | |
| 90 | Q | L | -1.1627 | |
| 91 | L | L | 0.0000 | |
| 92 | N | L | -2.2168 | |
| 93 | S | L | -1.4512 | |
| 94 | V | L | 0.0000 | |
| 95 | T | L | -1.3460 | |
| 96 | T | L | -1.3041 | |
| 97 | E | L | -1.9054 | |
| 98 | D | L | 0.0000 | |
| 99 | T | L | -0.5002 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.1266 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | -0.0769 | |
| 104 | C | L | 0.0000 | |
| 105 | A | L | 0.0000 | |
| 106 | R | L | -0.0266 | |
| 107 | S | L | 0.0000 | |
| 108 | G | L | 0.9971 | |
| 109 | W | L | 1.5943 | |
| 110 | L | L | 1.8476 | |
| 111 | L | L | 1.3236 | |
| 112A | P | L | 0.9399 | |
| 112 | Y | L | 1.3973 | |
| 113 | W | L | 0.0000 | |
| 114 | Y | L | 0.6731 | |
| 115 | F | L | 0.0000 | |
| 116 | D | L | -0.8824 | |
| 117 | V | L | -0.6945 | |
| 118 | W | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | A | L | -0.9580 | |
| 121 | G | L | -0.6048 | |
| 122 | T | L | -0.3655 | |
| 123 | T | L | -0.0231 | |
| 124 | V | L | 0.0000 | |
| 125 | T | L | -0.1778 | |
| 126 | V | L | 0.0000 | |
| 127 | S | L | -0.7304 | |
| 128 | S | L | -0.5412 | |
| 1 | D | K | -2.2237 | |
| 2 | V | K | 0.0000 | |
| 3 | Q | K | -2.1075 | |
| 4 | I | K | -1.6080 | |
| 5 | T | K | -1.3723 | |
| 6 | Q | K | 0.0000 | |
| 7 | S | K | -0.6990 | |
| 8 | P | K | -0.1859 | |
| 9 | S | K | -0.0774 | |
| 10 | Y | K | 0.7530 | |
| 11 | L | K | 0.4625 | |
| 12 | A | K | 0.3236 | |
| 13 | A | K | -0.4434 | |
| 14 | S | K | -0.8730 | |
| 15 | P | K | -1.6675 | |
| 16 | G | K | -1.8391 | |
| 17 | E | K | -2.2894 | |
| 18 | T | K | -1.0893 | |
| 19 | I | K | -0.1185 | |
| 20 | T | K | -0.2376 | |
| 21 | I | K | 0.0000 | |
| 22 | N | K | -1.5976 | |
| 23 | C | K | 0.0000 | |
| 24 | R | K | -3.0958 | |
| 25 | A | K | 0.0000 | |
| 26 | S | K | -1.9756 | |
| 27 | K | K | -1.9925 | |
| 28 | S | K | -1.4633 | |
| 29 | I | K | 0.0000 | |
| 36 | S | K | -1.1651 | |
| 37 | K | K | -1.5867 | |
| 38 | Y | K | -0.4954 | |
| 39 | L | K | 0.0000 | |
| 40 | A | K | 0.0000 | |
| 41 | W | K | 0.0000 | |
| 42 | Y | K | 0.0000 | |
| 43 | Q | K | 0.0000 | |
| 44 | E | K | -0.9815 | |
| 45 | K | K | -1.4038 | |
| 46 | P | K | -1.0906 | |
| 47 | G | K | -1.5649 | |
| 48 | K | K | -2.4002 | |
| 49 | T | K | -1.7296 | |
| 50 | N | K | 0.0000 | |
| 51 | E | K | -2.0197 | |
| 52 | L | K | 0.0000 | |
| 53 | L | K | 0.0000 | |
| 54 | I | K | 0.0000 | |
| 55 | Y | K | 0.3466 | |
| 56 | S | K | 0.0314 | |
| 57 | G | K | -0.5252 | |
| 65 | S | K | -0.7523 | |
| 66 | T | K | -0.2068 | |
| 67 | L | K | -0.1589 | |
| 68 | Q | K | -0.3861 | |
| 69 | S | K | -0.3673 | |
| 70 | G | K | -0.5055 | |
| 71 | I | K | -0.4252 | |
| 72 | P | K | -0.6479 | |
| 74 | S | K | -0.8876 | |
| 75 | R | K | -1.2748 | |
| 76 | F | K | 0.0000 | |
| 77 | R | K | -2.0382 | |
| 78 | G | K | 0.0000 | |
| 79 | S | K | -1.2205 | |
| 80 | G | K | -1.5009 | |
| 83 | S | K | -1.4073 | |
| 84 | G | K | -1.5804 | |
| 85 | T | K | -2.1290 | |
| 86 | D | K | -2.9877 | |
| 87 | F | K | 0.0000 | |
| 88 | T | K | -1.2919 | |
| 89 | L | K | 0.0000 | |
| 90 | T | K | 0.0000 | |
| 91 | I | K | 0.0000 | |
| 92 | S | K | -1.3782 | |
| 93 | S | K | -1.4591 | |
| 94 | L | K | 0.0000 | |
| 95 | E | K | -1.8908 | |
| 96 | P | K | -1.4407 | |
| 97 | E | K | -1.9514 | |
| 98 | D | K | -0.8396 | |
| 99 | F | K | 0.1716 | |
| 100 | A | K | -0.2362 | |
| 101 | M | K | -0.2263 | |
| 102 | Y | K | 0.0000 | |
| 103 | Y | K | 0.0000 | |
| 104 | C | K | 0.0000 | |
| 105 | Q | K | 0.0000 | |
| 106 | Q | K | 0.0000 | |
| 107 | H | K | 0.0000 | |
| 108 | N | K | -0.3014 | |
| 109 | E | K | -0.5988 | |
| 114 | Y | K | 0.0179 | |
| 115 | T | K | -0.4811 | |
| 116 | L | K | 0.0000 | |
| 117 | T | K | -0.7312 | |
| 118 | F | K | 0.0000 | |
| 119 | G | K | -1.0293 | |
| 120 | G | K | -0.8171 | |
| 121 | G | K | -0.8513 | |
| 122 | T | K | 0.0000 | |
| 123 | K | K | -0.8235 |