| Chain sequence(s) |
A: MIIEYDGEIDFTKGRVVLWFSIPGSPPSRL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:10)
[INFO] Main: Simulation completed successfully. (00:00:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 2.5103 | |
| 2 | I | A | 3.6311 | |
| 3 | I | A | 2.7211 | |
| 4 | E | A | -0.0495 | |
| 5 | Y | A | 0.1671 | |
| 6 | D | A | -2.0104 | |
| 7 | G | A | -2.1357 | |
| 8 | E | A | -2.4428 | |
| 9 | I | A | -1.2443 | |
| 10 | D | A | -1.7467 | |
| 11 | F | A | -0.4766 | |
| 12 | T | A | -1.1673 | |
| 13 | K | A | -2.2752 | |
| 14 | G | A | -1.7961 | |
| 15 | R | A | -1.4396 | |
| 16 | V | A | 0.9170 | |
| 17 | V | A | 3.1028 | |
| 18 | L | A | 3.6048 | |
| 19 | W | A | 3.3848 | |
| 20 | F | A | 3.3219 | |
| 21 | S | A | 1.6419 | |
| 22 | I | A | 1.7978 | |
| 23 | P | A | 0.1026 | |
| 24 | G | A | -0.5746 | |
| 25 | S | A | -0.2887 | |
| 26 | P | A | -0.6260 | |
| 27 | P | A | -0.6184 | |
| 28 | S | A | -0.1055 | |
| 29 | R | A | -1.2296 | |
| 30 | L | A | 0.4864 |