| Chain sequence(s) |
A: KLDLKLDLKLDL
C: KLDLKLDLKLDL B: KLDLKLDLKLDL E: KLDLKLDLKLDL D: KLDLKLDLKLDL G: KLDLKLDLKLDL F: KLDLKLDLKLDL H: KLDLKLDLKLDL input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:10)
[INFO] Main: Simulation completed successfully. (00:06:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.4612 | |
| 2 | L | A | -0.3948 | |
| 3 | D | A | -1.2934 | |
| 4 | L | A | -0.0944 | |
| 5 | K | A | -1.3503 | |
| 6 | L | A | -0.2128 | |
| 7 | D | A | -1.4262 | |
| 8 | L | A | -0.3293 | |
| 9 | K | A | -1.6735 | |
| 10 | L | A | -0.4058 | |
| 11 | D | A | -1.1286 | |
| 12 | L | A | 1.0047 | |
| 1 | K | B | -1.4811 | |
| 2 | L | B | -0.4090 | |
| 3 | D | B | -1.7440 | |
| 4 | L | B | -0.3380 | |
| 5 | K | B | -1.6240 | |
| 6 | L | B | -0.3697 | |
| 7 | D | B | -1.3871 | |
| 8 | L | B | -0.3270 | |
| 9 | K | B | -1.8974 | |
| 10 | L | B | -0.6023 | |
| 11 | D | B | -1.3731 | |
| 12 | L | B | 1.0001 | |
| 1 | K | C | -1.6777 | |
| 2 | L | C | -0.6387 | |
| 3 | D | C | -1.5511 | |
| 4 | L | C | -0.4501 | |
| 5 | K | C | -1.5842 | |
| 6 | L | C | -0.4850 | |
| 7 | D | C | -1.2887 | |
| 8 | L | C | -0.2597 | |
| 9 | K | C | -1.2581 | |
| 10 | L | C | -0.3514 | |
| 11 | D | C | -1.0889 | |
| 12 | L | C | 1.0457 | |
| 1 | K | D | -1.0668 | |
| 2 | L | D | -0.1163 | |
| 3 | D | D | -1.1023 | |
| 4 | L | D | -0.2811 | |
| 5 | K | D | -1.4630 | |
| 6 | L | D | -0.4677 | |
| 7 | D | D | -1.0587 | |
| 8 | L | D | -0.1880 | |
| 9 | K | D | -1.5142 | |
| 10 | L | D | -0.6134 | |
| 11 | D | D | -1.6077 | |
| 12 | L | D | 0.8229 | |
| 1 | K | E | -1.8851 | |
| 2 | L | E | -0.4567 | |
| 3 | D | E | -1.3012 | |
| 4 | L | E | -0.0009 | |
| 5 | K | E | -1.4099 | |
| 6 | L | E | -0.3108 | |
| 7 | D | E | -1.5200 | |
| 8 | L | E | -0.4379 | |
| 9 | K | E | -1.8388 | |
| 10 | L | E | -0.5169 | |
| 11 | D | E | -1.3727 | |
| 12 | L | E | 0.8796 | |
| 1 | K | F | -1.9582 | |
| 2 | L | F | -0.7973 | |
| 3 | D | F | -1.7796 | |
| 4 | L | F | -0.2339 | |
| 5 | K | F | -1.2083 | |
| 6 | L | F | 0.0139 | |
| 7 | D | F | -0.9420 | |
| 8 | L | F | -0.0083 | |
| 9 | K | F | -1.5721 | |
| 10 | L | F | -0.4606 | |
| 11 | D | F | -1.3852 | |
| 12 | L | F | 0.7878 | |
| 1 | K | G | -1.4872 | |
| 2 | L | G | 0.3145 | |
| 3 | D | G | -0.9024 | |
| 4 | L | G | 0.6863 | |
| 5 | K | G | -1.0176 | |
| 6 | L | G | 0.7341 | |
| 7 | D | G | -0.7665 | |
| 8 | L | G | 0.3288 | |
| 9 | K | G | -1.6305 | |
| 10 | L | G | -0.0093 | |
| 11 | D | G | -1.4496 | |
| 12 | L | G | 0.7622 | |
| 1 | K | H | -1.4328 | |
| 2 | L | H | 0.2118 | |
| 3 | D | H | -1.4669 | |
| 4 | L | H | 0.4097 | |
| 5 | K | H | -1.3808 | |
| 6 | L | H | 0.2959 | |
| 7 | D | H | -1.3657 | |
| 8 | L | H | 0.4169 | |
| 9 | K | H | -1.5239 | |
| 10 | L | H | -0.0002 | |
| 11 | D | H | -1.3669 | |
| 12 | L | H | 0.7896 |