Project name: AAB-PP3127

Status: done

Started: 2026-03-31 14:36:27
Settings
Chain sequence(s) H: QVQLVESGGGVVQPGESLKISCAASGFTFSSYGMHWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARSTYYYGASGYDYYFEPWGPGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQHIRSSLAWYQQKPGKAPKLLIYGASSRATGIPDRFSGSGSGTDFTLTISSLQPEDFATYYCQHTYITPYTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:02)
Show buried residues

Minimal score value
-3.1593
Maximal score value
2.0438
Average score
-0.5622
Total score value
-130.4374

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 Q H -1.3099
1 V H -0.7019
2 Q H -0.8006
3 L H 0.0000
4 V H 1.3791
5 E H 0.0000
6 S H -0.1179
7 G H -0.7692
8 G H 0.1436
9 G H 0.9278
10 V H 1.5536
11 V H 0.0000
12 Q H -1.7813
13 P H -1.9068
14 G H -2.0566
15 E H -2.2148
16 S H -1.6084
17 L H -1.0032
18 K H -1.9354
19 I H 0.0000
20 S H -0.3135
21 C H 0.0000
22 A H 0.0344
23 A H -0.3682
24 S H -0.5501
25 G H -0.8572
26 F H -0.2993
27 T H -0.1842
28 F H 0.0000
29 S H -0.8484
30 S H -0.1121
31 Y H 0.2096
32 G H 0.0112
33 M H 0.0000
34 H H 0.0000
35 W H 0.0000
36 V H 0.0000
37 R H 0.0000
38 Q H -0.7255
39 A H -1.0375
40 P H -0.9807
41 G H -1.5076
42 K H -2.3901
43 G H -1.6357
44 L H 0.0000
45 E H -1.2611
46 W H 0.0000
47 V H 0.0000
48 S H 0.0000
49 A H 0.0000
50 I H 0.0000
51 S H -0.3342
52 G H -0.5264
53 S H -0.7355
54 G H -0.8362
55 G H -0.7463
56 S H -0.2897
57 T H 0.2598
58 Y H 0.6400
59 Y H -0.3286
60 A H -1.1655
61 D H -2.3348
62 S H -1.7207
63 V H 0.0000
64 K H -2.4250
65 G H -1.6994
66 R H -1.2541
67 F H 0.0000
68 T H -0.6687
69 I H 0.0000
70 S H -0.4671
71 R H -1.0928
72 D H -1.6511
73 N H -1.8041
74 S H -1.6324
75 K H -2.4356
76 N H -1.8567
77 T H -0.9977
78 L H 0.0000
79 Y H -0.4644
80 L H 0.0000
81 Q H -1.1249
82 M H 0.0000
83 N H -1.7221
84 S H -1.6531
85 L H 0.0000
86 R H -2.7629
87 A H -1.9100
88 E H -2.3099
89 D H 0.0000
90 T H -0.4253
91 A H 0.0000
92 V H 0.9025
93 Y H 0.0000
94 Y H 0.0000
95 C H 0.0000
96 A H 0.0000
97 R H -0.3008
98 S H 0.0000
99 T H 0.8322
100 Y H 1.9990
101 Y H 1.7572
102 Y H 1.5924
103 G H 0.3877
104 A H -0.0952
105 S H -0.0947
106 G H 0.3707
107 Y H 1.5755
108 D H 1.3840
109 Y H 1.5030
110 Y H 0.6179
111 F H 0.0000
112 E H -0.8067
113 P H -0.8052
114 W H 0.0000
115 G H 0.0000
116 P H -0.3821
117 G H 0.1759
118 T H 0.7513
119 L H 1.7399
120 V H 0.0000
121 T H 0.3685
122 V H 0.0000
123 S H -0.6632
124 S H -0.5922
125 D L -2.0098
126 I L 0.0000
127 Q L -2.1923
128 M L 0.0000
129 T L -1.2858
130 Q L 0.0000
131 S L -0.7345
132 P L -0.5983
133 S L -0.9676
134 S L -1.1334
135 L L -0.6520
136 S L -0.7041
137 A L 0.0000
138 S L -0.1490
139 V L 0.7172
140 G L -0.7089
141 D L -1.6688
142 R L -2.3426
143 V L 0.0000
144 T L -0.6347
145 I L 0.0000
146 T L -0.9693
147 C L 0.0000
148 R L -3.0413
149 A L 0.0000
150 S L -2.2566
151 Q L -2.8582
152 H L -2.5759
153 I L 0.0000
154 R L -2.6009
155 S L -1.4918
156 S L -0.4057
157 L L 0.0000
158 A L 0.0000
159 W L 0.0000
160 Y L 0.0000
161 Q L -0.9659
162 Q L 0.0000
163 K L -2.1518
164 P L -1.4655
165 G L -1.6523
166 K L -2.5328
167 A L -1.5295
168 P L 0.0000
169 K L -1.9614
170 L L 0.0000
171 L L 0.0000
172 I L 0.0000
173 Y L -0.2182
174 G L -0.8490
175 A L 0.0000
176 S L -0.7945
177 S L -0.8370
178 R L -1.6862
179 A L -0.9741
180 T L -0.6046
181 G L -0.9199
182 I L 0.0000
183 P L -1.3878
184 D L -2.3082
185 R L -1.6191
186 F L 0.0000
187 S L -1.0285
188 G L -0.5972
189 S L -0.8303
190 G L -1.4372
191 S L -1.8312
192 G L -2.4331
193 T L -2.6645
194 D L -3.1593
195 F L 0.0000
196 T L -0.9089
197 L L 0.0000
198 T L -0.6133
199 I L 0.0000
200 S L -1.6827
201 S L -1.2902
202 L L 0.0000
203 Q L -0.7791
204 P L -0.6488
205 E L -1.8871
206 D L 0.0000
207 F L -0.5658
208 A L 0.0000
209 T L -1.2504
210 Y L 0.0000
211 Y L 0.0000
212 C L 0.0000
213 Q L 0.0000
214 H L 0.0000
215 T L 1.2675
216 Y L 1.5145
217 I L 2.0438
218 T L 0.8255
219 P L -0.0040
220 Y L 0.0000
221 T L -0.4694
222 F L -0.4913
223 G L 0.0000
224 Q L -1.6146
225 G L 0.0000
226 T L 0.0000
227 K L -2.1467
228 V L 0.0000
229 E L -0.9100
230 I L 0.9385
231 K L -0.7858
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Laboratory of Theory of Biopolymers 2018