| Chain sequence(s) |
A: SLKDELEEIYQTFKIIYDFFKEDIESGKMKGEDVIMLIKSNLDYGYGETKAYPIVKPLFEKIIKEGKKEGKDTVTIIEEFIEKLEELVKET
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:13)
[INFO] Main: Simulation completed successfully. (00:04:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -1.4218 | |
| 2 | L | A | -1.5332 | |
| 3 | K | A | -2.9683 | |
| 4 | D | A | -3.3187 | |
| 5 | E | A | -2.9555 | |
| 6 | L | A | 0.0000 | |
| 7 | E | A | -3.9956 | |
| 8 | E | A | -3.5441 | |
| 9 | I | A | 0.0000 | |
| 10 | Y | A | -2.3440 | |
| 11 | Q | A | -1.7968 | |
| 12 | T | A | -0.7294 | |
| 13 | F | A | 0.0000 | |
| 14 | K | A | -0.8541 | |
| 15 | I | A | 1.4074 | |
| 16 | I | A | 0.9755 | |
| 17 | Y | A | 0.0000 | |
| 18 | D | A | -0.8999 | |
| 19 | F | A | 1.1135 | |
| 20 | F | A | -0.6297 | |
| 21 | K | A | -1.9144 | |
| 22 | E | A | -3.3346 | |
| 23 | D | A | -3.2337 | |
| 24 | I | A | -3.3137 | |
| 25 | E | A | -3.6931 | |
| 26 | S | A | -2.8451 | |
| 27 | G | A | -2.7619 | |
| 28 | K | A | -3.0958 | |
| 29 | M | A | -2.9716 | |
| 30 | K | A | -3.5070 | |
| 31 | G | A | 0.0000 | |
| 32 | E | A | -2.9347 | |
| 33 | D | A | -2.7473 | |
| 34 | V | A | 0.0000 | |
| 35 | I | A | 0.0000 | |
| 36 | M | A | -0.4465 | |
| 37 | L | A | -0.2831 | |
| 38 | I | A | 0.0000 | |
| 39 | K | A | -0.7254 | |
| 40 | S | A | -0.1084 | |
| 41 | N | A | -0.3596 | |
| 42 | L | A | 0.0000 | |
| 43 | D | A | -0.4364 | |
| 44 | Y | A | 0.3747 | |
| 45 | G | A | -0.4182 | |
| 46 | Y | A | -0.9904 | |
| 47 | G | A | -1.0863 | |
| 48 | E | A | -2.1255 | |
| 49 | T | A | -1.7424 | |
| 50 | K | A | -2.0635 | |
| 51 | A | A | 0.0000 | |
| 52 | Y | A | -0.7679 | |
| 53 | P | A | -0.4943 | |
| 54 | I | A | 0.3866 | |
| 55 | V | A | 0.0000 | |
| 56 | K | A | -0.5848 | |
| 57 | P | A | -0.5790 | |
| 58 | L | A | -0.7223 | |
| 59 | F | A | 0.0000 | |
| 60 | E | A | -2.1811 | |
| 61 | K | A | -2.9909 | |
| 62 | I | A | -2.4882 | |
| 63 | I | A | -2.8729 | |
| 64 | K | A | -4.4323 | |
| 65 | E | A | -4.8797 | |
| 66 | G | A | 0.0000 | |
| 67 | K | A | -5.0402 | |
| 68 | K | A | -4.7472 | |
| 69 | E | A | -4.6002 | |
| 70 | G | A | -3.7722 | |
| 71 | K | A | -3.4849 | |
| 72 | D | A | -3.0916 | |
| 73 | T | A | -2.6351 | |
| 74 | V | A | 0.0000 | |
| 75 | T | A | -1.5078 | |
| 76 | I | A | 0.0000 | |
| 77 | I | A | 0.0000 | |
| 78 | E | A | -2.5598 | |
| 79 | E | A | -2.4508 | |
| 80 | F | A | 0.0000 | |
| 81 | I | A | 0.0000 | |
| 82 | E | A | -3.6491 | |
| 83 | K | A | -3.0657 | |
| 84 | L | A | 0.0000 | |
| 85 | E | A | -3.7367 | |
| 86 | E | A | -3.8140 | |
| 87 | L | A | -2.7350 | |
| 88 | V | A | 0.0000 | |
| 89 | K | A | -3.7119 | |
| 90 | E | A | -3.2227 | |
| 91 | T | A | -2.1713 |