| Chain sequence(s) |
A: PWCQPGYAYNPVLGICTITLSRIEHPGNYDY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | 0.9422 | |
| 2 | W | A | 1.5748 | |
| 3 | C | A | 1.2024 | |
| 4 | Q | A | -0.1090 | |
| 5 | P | A | -0.4831 | |
| 6 | G | A | 0.3442 | |
| 7 | Y | A | 1.3678 | |
| 8 | A | A | 1.6677 | |
| 9 | Y | A | 2.5368 | |
| 10 | N | A | 2.1207 | |
| 11 | P | A | 1.5480 | |
| 12 | V | A | 2.6773 | |
| 13 | L | A | 2.7832 | |
| 14 | G | A | 1.8039 | |
| 15 | I | A | 2.9878 | |
| 16 | C | A | 2.3871 | |
| 17 | T | A | 1.8846 | |
| 18 | I | A | 1.9088 | |
| 19 | T | A | 1.5340 | |
| 20 | L | A | 1.5128 | |
| 21 | S | A | -0.1463 | |
| 22 | R | A | -0.7193 | |
| 23 | I | A | 0.6964 | |
| 24 | E | A | -1.5601 | |
| 25 | H | A | -2.0067 | |
| 26 | P | A | -1.7745 | |
| 27 | G | A | -1.7439 | |
| 28 | N | A | -2.0160 | |
| 29 | Y | A | -0.6697 | |
| 30 | D | A | -1.2686 | |
| 31 | Y | A | 0.5635 |