| Chain sequence(s) |
L: KSWPYVAAGNISD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 174 | K | L | -1.7391 | |
| 175 | S | L | -0.3097 | |
| 176 | W | L | 1.1017 | |
| 177 | P | L | 0.2062 | |
| 178 | Y | L | 1.3203 | |
| 179 | V | L | 0.5313 | |
| 180 | A | L | 0.0921 | |
| 181 | A | L | -0.0152 | |
| 182 | G | L | -0.6888 | |
| 183 | N | L | -1.0160 | |
| 184 | I | L | 1.6214 | |
| 185 | S | L | -0.1944 | |
| 186 | D | L | -1.8280 |