Project name: 8OZ3

Status: done

Started: 2026-03-23 03:19:58
Settings
Chain sequence(s) A: VQLLESGGGLVQPGGSLRLSCAASGFNFGYSYMSWVRQAPGKGLEWVSSIGSTSSHTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARVYSSPGIDYWGQGTLVTVSS
C: DPCSNCPAGTFCDNNRNQICSPCPPNSFSSAGGQRTCDICRQCKGVFRTRKECSSTSNAECDCTPGFHCLGAGCSMCEQDCKQGQELTKKGCKDCSFGTFNDQKRGICRPWTDCSLDGKSVLVQGTKERDVVCGPG
B: SDIQMTQSPSSLSASVGDRVTITCRASQSIGSTLNWYQQKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYTWVPFTFGQGTKLEIK
D: DPCSNCPAGTFCDNNRNQICSPCPPNSFSSAGGQRTCDICRQCKGVFRTRKECSSTSNAECDCTPGFHCLGAGCSMCEQDCKQGQELTKKGCKDCSFGTFNDQKRGICRPWTDCSLDGKSVLVQGTKERDVVCGPG
H: EVQLLESGGGLVQPGGSLRLSCAASGFNFGYSYMSWVRQAPGKGLEWVSSIGSTSSHTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARVYSSPGIDYWGQGTLVTVSS
L: SDIQMTQSPSSLSASVGDRVTITCRASQSIGSTLNWYQQKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYTWVPFTFGQGTKLEIK
input PDB
Selected Chain(s) A,C,B,D,H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:07:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:07:29)
Show buried residues

Minimal score value
-3.9458
Maximal score value
3.115
Average score
-0.6899
Total score value
-500.1461

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 V A 0.9773
3 Q A -0.1319
4 L A 0.0000
5 L A 0.1900
6 E A 0.0000
7 S A -0.4186
8 G A -0.7395
9 G A 0.0923
10 G A 0.8636
11 L A 1.4458
12 V A 0.0088
13 Q A -1.2999
14 P A -1.6142
15 G A -1.4716
16 G A -1.0819
17 S A -1.2854
18 L A -0.7976
19 R A -1.7245
20 L A 0.0000
21 S A -0.4179
22 C A 0.0000
23 A A -0.3214
24 A A 0.0000
25 S A -0.4811
26 G A -0.0968
27 F A 0.1573
28 N A -0.2206
29 F A 0.0000
30 G A -0.1135
31 Y A 1.0644
32 S A 0.0000
33 Y A 0.0000
34 M A 0.0000
35 S A 0.0000
36 W A 0.0000
37 V A 0.0000
38 R A 0.0000
39 Q A -0.8691
40 A A -1.1065
41 P A -0.8742
42 G A -1.4638
43 K A -2.4334
44 G A -1.6944
45 L A 0.0000
46 E A -1.7044
47 W A 0.0000
48 V A 0.0000
49 S A 0.0000
50 S A 0.0000
51 I A 0.0000
52 G A -0.3931
53 S A 0.0035
54 T A -0.2654
55 S A -0.6462
56 S A -0.7285
57 H A -1.0385
58 T A -0.4206
59 Y A -0.3077
60 Y A -0.6818
61 A A -1.3853
62 D A -2.3592
63 S A -1.7616
64 V A 0.0000
65 K A -2.4709
66 G A -1.6580
67 R A 0.0000
68 F A 0.0000
69 T A -0.7472
70 I A 0.0000
71 S A -0.4858
72 R A -0.9747
73 D A -1.5529
74 N A -1.7055
75 S A -1.6707
76 K A -2.4163
77 N A -1.9430
78 T A -1.1005
79 L A 0.0000
80 Y A -0.4547
81 L A 0.0000
82 Q A -1.0762
83 M A 0.0000
84 N A -1.6037
85 S A -1.3627
86 L A 0.0000
87 R A -2.2787
88 A A -1.7431
89 E A -2.2353
90 D A 0.0000
91 T A -0.3941
92 A A 0.0000
93 V A 0.5546
94 Y A 0.0000
95 Y A 0.0000
96 C A 0.0000
97 A A 0.0000
98 R A 0.0000
99 V A 0.0000
100 Y A 0.8297
101 S A 0.1902
102 S A -0.0515
103 P A 0.0000
104 G A 0.0000
105 I A 0.0000
106 D A -0.1741
107 Y A 0.5529
108 W A -0.0545
109 G A 0.0000
110 Q A -1.5004
111 G A 0.0000
112 T A 0.3037
113 L A 1.3084
114 V A 0.0000
115 T A 0.3682
116 V A 0.0000
117 S A -0.4035
118 S A -0.8977
2 S B -0.7491
3 D B -1.1142
4 I B 0.0000
5 Q B -1.8197
6 M B 0.0000
7 T B -1.2981
8 Q B 0.0000
9 S B -0.5489
10 P B -0.5812
11 S B -0.8603
12 S B -1.0737
13 L B -0.6337
14 S B -0.6329
15 A B -0.3663
16 S B -0.1307
17 V B 0.3660
18 G B -0.9309
19 D B -1.9344
20 R B -2.4911
21 V B 0.0000
22 T B -0.5063
23 I B 0.0000
24 T B -0.8426
25 C B 0.0000
26 R B -2.3128
27 A B 0.0000
28 S B -1.4273
29 Q B -1.0787
30 S B -0.8932
31 I B 0.0000
32 G B -0.6346
33 S B 0.0000
34 T B 0.0000
35 L B 0.0000
36 N B 0.0000
37 W B 0.0000
38 Y B 0.0000
39 Q B 0.0000
40 Q B -1.5049
41 K B -1.9805
42 P B -1.2953
43 G B -1.7284
44 K B -2.6827
45 A B -1.6913
46 P B 0.0000
47 K B -1.9217
48 L B 0.0000
49 L B 0.0000
50 I B 0.0000
51 Y B 0.1352
52 G B -0.1166
53 A B 0.0000
54 S B -0.3570
55 S B -0.2135
56 L B 0.1742
57 Q B -0.3887
58 S B -0.4094
59 G B -0.5029
60 V B -0.3998
61 P B -0.3534
62 S B -0.4329
63 R B -0.9262
64 F B 0.0000
65 S B -0.3558
66 G B -0.3169
67 S B -0.7367
68 G B -1.1665
69 S B -0.9812
70 G B -1.1325
71 T B -1.6424
72 D B -2.5210
73 F B 0.0000
74 T B -0.8208
75 L B 0.0000
76 T B -0.6720
77 I B 0.0000
78 S B -1.5411
79 S B -1.2715
80 L B 0.0000
81 Q B -1.1549
82 P B -0.7609
83 E B -1.9100
84 D B 0.0000
85 F B -0.6934
86 A B 0.0000
87 T B -1.1330
88 Y B 0.0000
89 Y B 0.0000
90 C B 0.0000
91 Q B 0.0000
92 Q B 0.0000
93 Y B 0.0000
94 Y B 0.0000
95 T B 0.0000
96 W B 0.0000
97 V B 0.0601
98 P B -0.2824
99 F B 0.0000
100 T B -0.6460
101 F B -0.5775
102 G B 0.0000
103 Q B -1.7666
104 G B 0.0000
105 T B 0.0000
106 K B -1.9791
107 L B 0.0000
108 E B -1.1143
109 I B 0.7313
110 K B -0.8952
26 D C -2.0957
27 P C -1.0969
28 C C -1.3125
29 S C -1.5076
30 N C -1.6448
31 C C 0.0000
32 P C -0.8271
33 A C -0.5193
34 G C 0.0000
35 T C -0.2896
36 F C -0.6030
37 C C -1.1705
38 D C -1.9115
39 N C -2.7217
40 N C -3.0981
41 R C -3.4029
42 N C -2.6701
43 Q C -1.7641
44 I C -0.1542
45 C C -0.7347
46 S C -0.2388
47 P C -0.2549
48 C C -0.2876
49 P C -0.5971
50 P C -0.9201
51 N C -1.4031
52 S C -0.7168
53 F C -0.3427
54 S C 0.0000
55 S C -0.4911
56 A C -0.3932
57 G C -1.1878
58 G C -1.5024
59 Q C -1.5806
60 R C -2.2542
61 T C -1.0334
62 C C -0.6047
63 D C -0.6297
64 I C -0.3511
65 C C 0.0000
66 R C 0.0000
67 Q C -0.7132
68 C C -1.0719
69 K C -0.7130
70 G C -0.3396
71 V C -0.0710
72 F C 0.0000
73 R C -1.1960
74 T C -1.6829
75 R C -2.0407
76 K C -3.1929
77 E C -2.9225
78 C C -1.7617
79 S C -1.1176
80 S C -0.5587
81 T C -0.3222
82 S C -0.8952
83 N C -1.3336
84 A C 0.0000
85 E C -2.0746
86 C C 0.0000
87 D C 0.0000
88 C C 0.0000
89 T C -0.2446
90 P C -0.1407
91 G C -0.3645
92 F C -0.2801
93 H C 0.0000
94 C C 0.0559
95 L C -0.6482
96 G C -1.0857
97 A C -0.5936
98 G C -0.6682
99 C C 0.0000
100 S C 0.0000
101 M C -0.0629
102 C C 0.0000
103 E C -0.6360
104 Q C -1.4320
105 D C -1.3915
106 C C 0.0000
107 K C -3.1815
108 Q C -2.9862
109 G C 0.0000
110 Q C -2.6355
111 E C -1.6866
112 L C 0.0000
113 T C -1.7459
114 K C -2.6704
115 K C -2.6934
116 G C 0.0000
117 C C -1.9181
118 K C -2.5141
119 D C -2.7556
120 C C 0.0000
121 S C -0.1652
122 F C 1.3490
123 G C 0.1359
124 T C -0.5951
125 F C 0.0000
126 N C 0.0000
127 D C -2.4387
128 Q C -2.1949
129 K C -2.3048
130 R C 0.0000
131 G C 0.0000
132 I C -0.1778
133 C C -0.5954
134 R C -0.5950
135 P C -0.5107
136 W C -0.8677
137 T C -0.6300
138 D C -1.5892
139 C C 0.0000
140 S C -1.0361
141 L C -0.3383
142 D C -2.0650
143 G C -1.7984
144 K C -1.3911
145 S C 0.3224
146 V C 2.1553
147 L C 2.9629
148 V C 2.5340
149 Q C 0.2423
150 G C -0.6617
151 T C -1.5097
152 K C -2.3162
153 E C -3.2001
154 R C -3.0465
155 D C -1.7950
156 V C 0.0000
157 V C 1.9589
158 C C 1.1518
159 G C 0.8462
160 P C -0.7354
161 G C -0.9223
26 D D -1.9332
27 P D -1.0752
28 C D -1.2447
29 S D -1.4921
30 N D -1.6314
31 C D 0.0000
32 P D -0.8266
33 A D -0.5176
34 G D 0.0000
35 T D -0.2313
36 F D -0.4944
37 C D -1.0098
38 D D -1.7159
39 N D -2.6319
40 N D -3.0468
41 R D -3.3901
42 N D -2.6642
43 Q D -1.7602
44 I D -0.1748
45 C D -0.5326
46 S D -0.1920
47 P D -0.2187
48 C D -0.2912
49 P D -0.6053
50 P D -0.9213
51 N D -1.4309
52 S D -0.7507
53 F D -0.3629
54 S D 0.0000
55 S D -0.4704
56 A D -0.3869
57 G D -1.2121
58 G D -1.4773
59 Q D -1.4837
60 R D -2.1685
61 T D -0.9794
62 C D -0.6058
63 D D -0.6844
64 I D -0.3982
65 C D 0.0000
66 R D -0.8584
67 Q D -0.9008
68 C D 0.0000
69 K D -0.9693
70 G D -0.4383
71 V D 0.0000
72 F D 0.0000
73 R D -2.3167
74 T D -2.7415
75 R D -3.5177
76 K D -3.6994
77 E D -3.1271
78 C D -1.8364
79 S D -1.0641
80 S D -0.5399
81 T D -0.2773
82 S D -0.8048
83 N D -1.2273
84 A D 0.0000
85 E D -2.6368
86 C D 0.0000
87 D D -2.2613
88 C D 0.0000
89 T D -0.7983
90 P D -0.6956
91 G D -0.6631
92 F D -0.6147
93 H D -0.3869
94 C D -0.5366
95 L D -0.6026
96 G D -0.7835
97 A D -0.5021
98 G D -0.6735
99 C D 0.0000
100 S D 0.0000
101 M D -0.0134
102 C D 0.0000
103 E D -0.8246
104 Q D -1.5324
105 D D -1.7758
106 C D 0.0000
107 K D -3.8079
108 Q D -3.3233
109 G D 0.0000
110 Q D -2.9008
111 E D -1.6300
112 L D -0.9517
113 T D -1.2857
114 K D -2.3258
115 K D -2.5822
116 G D -1.6245
117 C D -2.1966
118 K D -2.9273
119 D D -2.9373
120 C D -1.3754
121 S D -0.4510
122 F D 1.3159
123 G D -0.0619
124 T D -0.6856
125 F D 0.0000
126 N D 0.0000
127 D D -2.7744
128 Q D -3.2231
129 K D -3.9458
130 R D -3.2229
131 G D -1.5295
132 I D 0.6169
133 C D -0.3749
134 R D -1.2566
135 P D -0.8026
136 W D -1.1052
137 T D -0.8081
138 D D -1.6327
139 C D 0.0000
140 S D -0.7918
141 L D -0.2052
142 D D -2.0480
143 G D -1.7203
144 K D -1.1651
145 S D 0.5291
146 V D 2.4323
147 L D 3.1150
148 V D 2.6600
149 Q D 0.3601
150 G D -0.4467
151 T D -1.3733
152 K D -2.2413
153 E D -3.1020
154 R D -2.6645
155 D D -1.6916
156 V D 0.0000
157 V D 2.1181
158 C D 1.2433
159 G D 1.0006
160 P D -0.6376
161 G D -0.8077
1 E H -2.0172
2 V H -1.1146
3 Q H -1.3653
4 L H 0.0000
5 L H -0.0608
6 E H 0.0000
7 S H 0.0000
8 G H 0.0000
9 G H 0.0000
10 G H 0.2574
11 L H -0.0848
12 V H -0.7144
13 Q H -1.6327
14 P H -1.5761
15 G H -1.3621
16 G H -1.0980
17 S H -1.2157
18 L H -0.6546
19 R H -1.2853
20 L H 0.0000
21 S H -0.1875
22 C H 0.0000
23 A H -0.4927
24 A H 0.0000
25 S H -1.3965
26 G H -1.3967
27 F H -0.8890
28 N H -1.1921
29 F H 0.0000
30 G H -0.7367
31 Y H 0.0769
32 S H 0.0000
33 Y H 0.0000
34 M H 0.0000
35 S H 0.0000
36 W H 0.0000
37 V H 0.0000
38 R H 0.0000
39 Q H 0.0000
40 A H -1.0770
41 P H 0.0000
42 G H -1.4279
43 K H -2.3226
44 G H -1.6457
45 L H 0.0000
46 E H -1.7501
47 W H 0.0000
48 V H 0.0000
49 S H 0.0000
50 S H 0.0000
51 I H 0.0000
52 G H -0.4550
53 S H -0.3701
54 T H -0.3409
55 S H -0.7315
56 S H -0.6521
57 H H -0.8468
58 T H -0.3452
59 Y H -0.2521
60 Y H -0.6908
61 A H -1.3597
62 D H -2.3347
63 S H -1.7454
64 V H 0.0000
65 K H -2.5358
66 G H -1.7854
67 R H -1.6143
68 F H 0.0000
69 T H -0.8367
70 I H 0.0000
71 S H -0.5131
72 R H -0.9831
73 D H -1.5780
74 N H -1.9030
75 S H -1.7043
76 K H -2.4365
77 N H -2.0801
78 T H -1.1749
79 L H 0.0000
80 Y H -0.2965
81 L H 0.0000
82 Q H -1.1736
83 M H 0.0000
84 N H -1.7518
85 S H -1.3659
86 L H 0.0000
87 R H -2.1577
88 A H -1.6367
89 E H -2.1585
90 D H 0.0000
91 T H -0.6449
92 A H 0.0000
93 V H 0.0000
94 Y H 0.0000
95 Y H 0.0000
96 C H 0.0000
97 A H 0.0000
98 R H 0.0000
99 V H 0.0000
100 Y H 0.3133
101 S H -0.0374
102 S H -0.1752
103 P H 0.0000
104 G H 0.0000
105 I H 0.0000
106 D H -0.2818
107 Y H 0.1605
108 W H -0.2904
109 G H 0.0000
110 Q H -0.8927
111 G H 0.0000
112 T H 0.0000
113 L H 0.0000
114 V H 0.0000
115 T H 0.0000
116 V H 0.0000
117 S H -0.8104
118 S H -0.4935
2 S L -0.6856
3 D L -0.9472
4 I L 0.0000
5 Q L -1.8017
6 M L 0.0000
7 T L -1.3754
8 Q L 0.0000
9 S L -0.6514
10 P L -0.6456
11 S L -0.9637
12 S L -1.0468
13 L L -0.5490
14 S L -0.5463
15 A L 0.0000
16 S L -0.0918
17 V L 0.5219
18 G L -0.7176
19 D L -1.5136
20 R L -2.2679
21 V L 0.0000
22 T L -0.5711
23 I L 0.0000
24 T L -0.8188
25 C L 0.0000
26 R L -2.4598
27 A L 0.0000
28 S L -1.4014
29 Q L -1.0505
30 S L -0.8563
31 I L 0.0000
32 G L -0.5966
33 S L -0.4368
34 T L 0.0000
35 L L 0.0000
36 N L 0.0000
37 W L 0.0000
38 Y L 0.0000
39 Q L 0.0000
40 Q L 0.0000
41 K L -1.7183
42 P L -1.3237
43 G L -1.7670
44 K L -2.4257
45 A L -1.3644
46 P L 0.0000
47 K L -1.6707
48 L L 0.0000
49 L L 0.0000
50 I L 0.0000
51 Y L 0.1802
52 G L 0.0000
53 A L 0.0000
54 S L -0.2765
55 S L 0.0007
56 L L 0.1950
57 Q L -0.4326
58 S L -0.4485
59 G L -0.5197
60 V L -0.3834
61 P L -0.3583
62 S L -0.4413
63 R L -0.9860
64 F L 0.0000
65 S L -0.2936
66 G L -0.2403
67 S L -0.5870
68 G L -1.0564
69 S L -0.8388
70 G L -1.0219
71 T L -1.4906
72 D L -2.1217
73 F L 0.0000
74 T L -0.7261
75 L L 0.0000
76 T L -0.6294
77 I L 0.0000
78 S L -1.6112
79 S L -1.2411
80 L L 0.0000
81 Q L -1.0134
82 P L -0.7584
83 E L -1.9283
84 D L 0.0000
85 F L -0.5530
86 A L 0.0000
87 T L -1.1236
88 Y L 0.0000
89 Y L 0.0000
90 C L 0.0000
91 Q L 0.0000
92 Q L 0.0000
93 Y L 0.0000
94 Y L 0.0000
95 T L 0.0000
96 W L 0.0000
97 V L 0.1215
98 P L -0.2329
99 F L 0.0000
100 T L -0.6432
101 F L -0.5988
102 G L 0.0000
103 Q L -1.8032
104 G L 0.0000
105 T L 0.0000
106 K L -2.1082
107 L L 0.0000
108 E L -0.4403
109 I L 1.0760
110 K L -0.6774
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Laboratory of Theory of Biopolymers 2018