| Chain sequence(s) |
H: EVTLVESGGGTVPVGGSVTLSCHASGFTFTDFYMHWVAQPPGGPPVVLGYVRDKAKGYTTELDPRFAGKLTLSVDTVTNVLYLNMTNLQAEDTATYYCAREGHTAAPFDYWGQGVMVTVSS
L: DIVLTQSPSSLSAAVGETVTLNCTSSSNIDKYLSWYKQAPGEPPQLLIYNTNNLASGVSSRFSGSGSGTSFSLTISSLQADDVATYWCLQHISRPRCFGTGTKLELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:09)
[INFO] Main: Simulation completed successfully. (00:02:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.8059 | |
| 2 | V | H | -0.6312 | |
| 3 | T | H | -0.1852 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0048 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1667 | |
| 8 | G | H | -0.4710 | |
| 9 | G | H | -0.2626 | |
| 10 | G | H | -0.2044 | |
| 11 | T | H | -0.0901 | |
| 12 | V | H | 0.0000 | |
| 13 | P | H | -0.0374 | |
| 14 | V | H | 0.3631 | |
| 15 | G | H | -0.6228 | |
| 16 | G | H | -0.5027 | |
| 17 | S | H | -0.6228 | |
| 18 | V | H | -0.3265 | |
| 19 | T | H | -0.2019 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | 0.1191 | |
| 22 | C | H | 0.0000 | |
| 23 | H | H | -0.1126 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.4681 | |
| 26 | G | H | -0.8632 | |
| 27 | F | H | -0.3971 | |
| 28 | T | H | -0.4486 | |
| 29 | F | H | 0.0000 | |
| 30 | T | H | -1.1342 | |
| 31 | D | H | -1.4929 | |
| 32 | F | H | -0.7671 | |
| 33 | Y | H | -0.5031 | |
| 34 | M | H | 0.0000 | |
| 35 | H | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | A | H | 0.0000 | |
| 39 | Q | H | 0.0000 | |
| 40 | P | H | -0.6229 | |
| 41 | P | H | -0.5290 | |
| 42 | G | H | -0.7121 | |
| 43 | G | H | -0.6291 | |
| 44 | P | H | -0.3937 | |
| 45 | P | H | 0.0000 | |
| 46 | V | H | 0.2107 | |
| 47 | V | H | 0.0000 | |
| 48 | L | H | 0.0000 | |
| 49 | G | H | 0.0000 | |
| 50 | Y | H | 0.0000 | |
| 51 | V | H | 0.0000 | |
| 52 | R | H | -1.0111 | |
| 53 | D | H | 0.0000 | |
| 54 | K | H | -2.0062 | |
| 55 | A | H | -1.5745 | |
| 56 | K | H | -2.2510 | |
| 57 | G | H | -1.5240 | |
| 58 | Y | H | -0.8465 | |
| 59 | T | H | -0.7345 | |
| 60 | T | H | -0.3534 | |
| 61 | E | H | -0.4277 | |
| 62 | L | H | -0.1808 | |
| 63 | D | H | 0.0000 | |
| 64 | P | H | -1.3375 | |
| 65 | R | H | -1.8405 | |
| 66 | F | H | -0.9530 | |
| 67 | A | H | -0.7256 | |
| 68 | G | H | -0.8767 | |
| 69 | K | H | -1.0161 | |
| 70 | L | H | 0.0000 | |
| 71 | T | H | -0.2161 | |
| 72 | L | H | 0.0000 | |
| 73 | S | H | -0.0161 | |
| 74 | V | H | -0.0452 | |
| 75 | D | H | -0.2385 | |
| 76 | T | H | 0.2059 | |
| 77 | V | H | 1.4446 | |
| 78 | T | H | 0.3440 | |
| 79 | N | H | -0.2128 | |
| 80 | V | H | 0.0807 | |
| 81 | L | H | 0.0000 | |
| 82 | Y | H | 0.1154 | |
| 83 | L | H | 0.0000 | |
| 84 | N | H | -0.3174 | |
| 85 | M | H | 0.0000 | |
| 86 | T | H | -0.9680 | |
| 87 | N | H | -1.5626 | |
| 88 | L | H | 0.0000 | |
| 89 | Q | H | -1.3866 | |
| 90 | A | H | -1.0541 | |
| 91 | E | H | -1.9991 | |
| 92 | D | H | -1.1949 | |
| 93 | T | H | -0.8605 | |
| 94 | A | H | 0.0000 | |
| 95 | T | H | -0.0323 | |
| 96 | Y | H | 0.0000 | |
| 97 | Y | H | 0.0000 | |
| 98 | C | H | 0.0000 | |
| 99 | A | H | 0.0000 | |
| 100 | R | H | 0.0000 | |
| 101 | E | H | -0.3771 | |
| 102 | G | H | 0.0000 | |
| 103 | H | H | -1.1638 | |
| 104 | T | H | -0.5429 | |
| 105 | A | H | -0.4314 | |
| 106 | A | H | 0.0000 | |
| 107 | P | H | 0.0000 | |
| 108 | F | H | 0.0000 | |
| 109 | D | H | -0.2152 | |
| 110 | Y | H | 0.3873 | |
| 111 | W | H | 0.1958 | |
| 112 | G | H | 0.0000 | |
| 113 | Q | H | -0.9027 | |
| 114 | G | H | -0.3265 | |
| 115 | V | H | 0.1618 | |
| 116 | M | H | 0.3066 | |
| 117 | V | H | 0.0000 | |
| 118 | T | H | -0.3079 | |
| 119 | V | H | 0.0000 | |
| 120 | S | H | -0.0391 | |
| 121 | S | H | -0.0104 | |
| 1 | D | L | -1.6716 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 1.2691 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | 0.0952 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.6659 | |
| 8 | P | L | -0.6271 | |
| 9 | S | L | -0.7661 | |
| 10 | S | L | -0.8398 | |
| 11 | L | L | -0.4838 | |
| 12 | S | L | -0.6223 | |
| 13 | A | L | 0.0000 | |
| 14 | A | L | -0.1824 | |
| 15 | V | L | 0.7334 | |
| 16 | G | L | -0.1331 | |
| 17 | E | L | -0.7640 | |
| 18 | T | L | -0.5183 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.2539 | |
| 21 | L | L | 0.0000 | |
| 22 | N | L | -0.8063 | |
| 23 | C | L | 0.0000 | |
| 24 | T | L | -0.3151 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -0.1984 | |
| 27 | S | L | -0.8990 | |
| 28 | N | L | -1.7887 | |
| 29 | I | L | 0.0000 | |
| 30 | D | L | -1.9427 | |
| 31 | K | L | -1.9752 | |
| 32 | Y | L | -0.5836 | |
| 33 | L | L | 0.0000 | |
| 34 | S | L | 0.0000 | |
| 35 | W | L | 0.0000 | |
| 36 | Y | L | 0.0000 | |
| 37 | K | L | 0.0000 | |
| 38 | Q | L | 0.0000 | |
| 39 | A | L | -0.7794 | |
| 40 | P | L | -0.5878 | |
| 41 | G | L | -0.9986 | |
| 42 | E | L | -1.2002 | |
| 43 | P | L | -0.8602 | |
| 44 | P | L | 0.0000 | |
| 45 | Q | L | -0.6156 | |
| 46 | L | L | 0.0025 | |
| 47 | L | L | 0.0000 | |
| 48 | I | L | 0.0000 | |
| 49 | Y | L | -0.2575 | |
| 50 | N | L | -0.7829 | |
| 51 | T | L | 0.0000 | |
| 52 | N | L | -1.6230 | |
| 53 | N | L | -0.7261 | |
| 54 | L | L | 0.0177 | |
| 55 | A | L | -0.1446 | |
| 56 | S | L | -0.3047 | |
| 57 | G | L | -0.4058 | |
| 58 | V | L | -0.1337 | |
| 59 | S | L | -0.2542 | |
| 60 | S | L | -0.3605 | |
| 61 | R | L | -0.5680 | |
| 62 | F | L | 0.0000 | |
| 63 | S | L | -0.6237 | |
| 64 | G | L | -0.8221 | |
| 65 | S | L | -1.1375 | |
| 66 | G | L | -1.1890 | |
| 67 | S | L | -1.5112 | |
| 68 | G | L | -1.5382 | |
| 69 | T | L | -1.1587 | |
| 70 | S | L | -0.9806 | |
| 71 | F | L | 0.0000 | |
| 72 | S | L | -0.6884 | |
| 73 | L | L | 0.0000 | |
| 74 | T | L | -0.3297 | |
| 75 | I | L | 0.0000 | |
| 76 | S | L | -0.6747 | |
| 77 | S | L | -0.5075 | |
| 78 | L | L | 0.0000 | |
| 79 | Q | L | -0.6571 | |
| 80 | A | L | -0.4743 | |
| 81 | D | L | -1.5908 | |
| 82 | D | L | 0.0000 | |
| 83 | V | L | -0.3196 | |
| 84 | A | L | 0.0000 | |
| 85 | T | L | -0.6669 | |
| 86 | Y | L | 0.0000 | |
| 87 | W | L | 0.0000 | |
| 88 | C | L | 0.0000 | |
| 89 | L | L | 0.0000 | |
| 90 | Q | L | 0.0000 | |
| 91 | H | L | 0.1564 | |
| 92 | I | L | 0.2861 | |
| 93 | S | L | -0.3442 | |
| 94 | R | L | -1.1772 | |
| 95 | P | L | -0.9925 | |
| 96 | R | L | 0.0000 | |
| 97 | C | L | 0.1815 | |
| 98 | F | L | 0.0000 | |
| 99 | G | L | 0.0000 | |
| 100 | T | L | -0.1698 | |
| 101 | G | L | 0.0000 | |
| 102 | T | L | 0.0000 | |
| 103 | K | L | -1.4054 | |
| 104 | L | L | 0.0000 | |
| 105 | E | L | -0.4072 | |
| 106 | L | L | 0.0376 | |
| 107 | K | L | -1.1819 |